Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0556
(429 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35390.1 68417.m05027 DNA-binding protein-related contains Pf... 27 4.1
At1g21270.1 68414.m02658 wall-associated kinase 2 (WAK2) identic... 27 4.1
At5g03560.1 68418.m00314 expressed protein 27 5.4
At4g16900.1 68417.m02551 disease resistance protein (TIR-NBS-LRR... 27 7.1
At3g44800.1 68416.m04826 meprin and TRAF homology domain-contain... 27 7.1
At3g01810.1 68416.m00123 expressed protein 27 7.1
At1g48600.2 68414.m05434 phosphoethanolamine N-methyltransferase... 27 7.1
At1g48600.1 68414.m05435 phosphoethanolamine N-methyltransferase... 27 7.1
At1g14740.1 68414.m01762 expressed protein 27 7.1
At3g48830.1 68416.m05333 polynucleotide adenylyltransferase fami... 26 9.4
At1g21230.1 68414.m02653 wall-associated kinase, putative simila... 26 9.4
At1g21210.1 68414.m02651 wall-associated kinase 4 26 9.4
>At4g35390.1 68417.m05027 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 299
Score = 27.5 bits (58), Expect = 4.1
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +1
Query: 46 LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRD-P 222
+ LNRS+ D A TTP SS S P R ++ K K +I RD P
Sbjct: 30 MELNRSEADEAKAETTPTGGATSSATASGSSSGRR--PRGRPAGSKNKPKPPTIITRDSP 87
Query: 223 NGLRRRV 243
N LR V
Sbjct: 88 NVLRSHV 94
>At1g21270.1 68414.m02658 wall-associated kinase 2 (WAK2) identical
to wall-associated kinase 2 [Arabidopsis thaliana]
GI:4826399; induced by salicylic acid or INA
(PMID:10380805)
Length = 732
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 203 ASISAIQMGFDVASRVLMRNATSKVTLFRASRLSGLHSEHI 325
ASI I A+ +L +N T+KV F ASRL + E +
Sbjct: 521 ASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQL 561
>At5g03560.1 68418.m00314 expressed protein
Length = 241
Score = 27.1 bits (57), Expect = 5.4
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +1
Query: 79 LPSTTPRQERKSSTDYS---EPRHRTELYPDLRSRDARVKKKTDSIDL 213
L +++ R+E+K++ +S + H +L P+LR R V+ +TD I++
Sbjct: 64 LTASSKRKEKKTTERFSAVIDAVHDRKLPPELRGRRDFVRSETDIINV 111
>At4g16900.1 68417.m02551 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1072
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 86 LGRAASCCDLLRLSPAPGDSSLPARAG 6
LGR SC RLSP G + R G
Sbjct: 1031 LGRIGSCATYTRLSPGKGSARAGTRLG 1057
>At3g44800.1 68416.m04826 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein
Length = 564
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 109 KSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDL 213
K S + +PR R LY D + + + K+T S+D+
Sbjct: 142 KESQEVIKPRKRMRLYGDGGAVSSHLHKETSSVDV 176
>At3g01810.1 68416.m00123 expressed protein
Length = 921
Score = 26.6 bits (56), Expect = 7.1
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 28 ESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKK 192
+S + L +NRS +L S ERK + Y H T L +++ ++RVKK
Sbjct: 367 KSVRSSLDINRSNSRLSLFS-----ERKEAKVYPNSTHDTTLESKIKNLESRVKK 416
>At1g48600.2 68414.m05434 phosphoethanolamine N-methyltransferase 2,
putative (NMT2) very similar to |PEM2_ARATH Putative
phosphoethanolamine N-methyltransferase 2 (EC 2.1.1.103)
(SP:Q944H0){Arabidopsis thaliana}; very similar to
Halotolerance protein Hal3b (SP:P94063)[Arabidopsis
thaliana]; to similar to GB:AAF61950 from [Spinacia
oleracea]
Length = 491
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 103 ERKSS-TDYSEPRHRTELYPDLRSRDA 180
+RKS+ T Y EPR T+++ + ++RDA
Sbjct: 168 KRKSNPTHYREPRFYTKVFQECQTRDA 194
>At1g48600.1 68414.m05435 phosphoethanolamine N-methyltransferase 2,
putative (NMT2) very similar to |PEM2_ARATH Putative
phosphoethanolamine N-methyltransferase 2 (EC 2.1.1.103)
(SP:Q944H0){Arabidopsis thaliana}; very similar to
Halotolerance protein Hal3b (SP:P94063)[Arabidopsis
thaliana]; to similar to GB:AAF61950 from [Spinacia
oleracea]
Length = 475
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 103 ERKSS-TDYSEPRHRTELYPDLRSRDA 180
+RKS+ T Y EPR T+++ + ++RDA
Sbjct: 152 KRKSNPTHYREPRFYTKVFQECQTRDA 178
>At1g14740.1 68414.m01762 expressed protein
Length = 733
Score = 26.6 bits (56), Expect = 7.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 400 GAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSK 284
G +L + LC N+ K SL + GK+++T S K
Sbjct: 67 GNELTLSYLCENSGKLAESLGQKGKEVVTFSENSSYDDK 105
>At3g48830.1 68416.m05333 polynucleotide adenylyltransferase family
protein / RNA recognition motif (RRM)-containing protein
similar to SP|P13685 Poly(A) polymerase (EC 2.7.7.19)
{Escherichia coli O157:H7}; contains Pfam profiles
PF01743: polyA polymerase family protein, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 881
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 184 HVHHGSEGPDITQFDVGARNSL*TTSVPGG 95
HVH G++ +++ F A+NSL T G
Sbjct: 142 HVHIGNDMIEVSSFSTSAQNSLRNTRTGSG 171
>At1g21230.1 68414.m02653 wall-associated kinase, putative similar
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
salicylic acid or INA (PMID:10380805)
Length = 733
Score = 26.2 bits (55), Expect = 9.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 203 ASISAIQMGFDVASRVLMRNATSKVTLFRASRLSGLHSEHI 325
ASI I A+ +L N T+KV F ASRL + E +
Sbjct: 525 ASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQL 565
>At1g21210.1 68414.m02651 wall-associated kinase 4
Length = 738
Score = 26.2 bits (55), Expect = 9.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 203 ASISAIQMGFDVASRVLMRNATSKVTLFRASRLSGLHSEHI 325
ASI I A+ +L N T+KV F ASRL + E +
Sbjct: 527 ASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDL 567
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,844,284
Number of Sequences: 28952
Number of extensions: 203628
Number of successful extensions: 629
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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