Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0552
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 147 8e-36
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 147 8e-36
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 147 8e-36
U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,... 32 0.46
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 31 0.81
AF077546-2|AAC26313.2| 293|Caenorhabditis elegans Hypothetical ... 29 4.3
U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 28 7.5
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 28 7.5
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 27 9.9
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 27 9.9
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 147 bits (356), Expect = 8e-36
Identities = 65/86 (75%), Positives = 75/86 (87%)
Frame = -1
Query: 513 EGETDDEYIWCIEQTLIFPDGKPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGV 334
+GETD+EY WCIEQT++F DG+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGV
Sbjct: 104 KGETDEEYEWCIEQTIVFKDGQPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGV 163
Query: 333 HNLYKMFREGLLKVPAINVNDSVTKS 256
HNL KM +G LKVPAINVNDSVTKS
Sbjct: 164 HNLAKMLAKGDLKVPAINVNDSVTKS 189
Score = 138 bits (334), Expect = 4e-33
Identities = 66/86 (76%), Positives = 73/86 (84%)
Frame = -3
Query: 262 KKQFDNLYGCRESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEID 83
K +FDNLYG RESL DGIKRATD+M+AGKV VVAGYGDVGKG A + K FG RVIVTEID
Sbjct: 188 KSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTEID 247
Query: 82 PINALQAAMEGFQVTTMEEAAEVGQI 5
PINALQAAMEG++VTT+EEAA I
Sbjct: 248 PINALQAAMEGYEVTTLEEAAPKANI 273
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -2
Query: 620 LIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWK 510
L LGAEVQWSS NI+STQD AAAA+ G+P+YAWK
Sbjct: 68 LTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWK 104
Score = 50.8 bits (116), Expect = 9e-07
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -3
Query: 706 KYAPAKILKGARIAGSLHMTVQTAVLIET 620
KY P++ LKGARIAG LHMT+QTAVLIET
Sbjct: 39 KYGPSQPLKGARIAGCLHMTIQTAVLIET 67
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 147 bits (356), Expect = 8e-36
Identities = 65/86 (75%), Positives = 75/86 (87%)
Frame = -1
Query: 513 EGETDDEYIWCIEQTLIFPDGKPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGV 334
+GETD+EY WCIEQT++F DG+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGV
Sbjct: 104 KGETDEEYEWCIEQTIVFKDGQPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGV 163
Query: 333 HNLYKMFREGLLKVPAINVNDSVTKS 256
HNL KM +G LKVPAINVNDSVTKS
Sbjct: 164 HNLAKMLAKGDLKVPAINVNDSVTKS 189
Score = 138 bits (334), Expect = 4e-33
Identities = 66/86 (76%), Positives = 73/86 (84%)
Frame = -3
Query: 262 KKQFDNLYGCRESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEID 83
K +FDNLYG RESL DGIKRATD+M+AGKV VVAGYGDVGKG A + K FG RVIVTEID
Sbjct: 188 KSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTEID 247
Query: 82 PINALQAAMEGFQVTTMEEAAEVGQI 5
PINALQAAMEG++VTT+EEAA I
Sbjct: 248 PINALQAAMEGYEVTTLEEAAPKANI 273
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -2
Query: 620 LIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWK 510
L LGAEVQWSS NI+STQD AAAA+ G+P+YAWK
Sbjct: 68 LTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWK 104
Score = 50.8 bits (116), Expect = 9e-07
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -3
Query: 706 KYAPAKILKGARIAGSLHMTVQTAVLIET 620
KY P++ LKGARIAG LHMT+QTAVLIET
Sbjct: 39 KYGPSQPLKGARIAGCLHMTIQTAVLIET 67
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 147 bits (356), Expect = 8e-36
Identities = 65/86 (75%), Positives = 75/86 (87%)
Frame = -1
Query: 513 EGETDDEYIWCIEQTLIFPDGKPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGV 334
+GETD+EY WCIEQT++F DG+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGV
Sbjct: 104 KGETDEEYEWCIEQTIVFKDGQPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGV 163
Query: 333 HNLYKMFREGLLKVPAINVNDSVTKS 256
HNL KM +G LKVPAINVNDSVTKS
Sbjct: 164 HNLAKMLAKGDLKVPAINVNDSVTKS 189
Score = 138 bits (334), Expect = 4e-33
Identities = 66/86 (76%), Positives = 73/86 (84%)
Frame = -3
Query: 262 KKQFDNLYGCRESLLDGIKRATDIMIAGKVCVVAGYGDVGKGCAQAFKGFGGRVIVTEID 83
K +FDNLYG RESL DGIKRATD+M+AGKV VVAGYGDVGKG A + K FG RVIVTEID
Sbjct: 188 KSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTEID 247
Query: 82 PINALQAAMEGFQVTTMEEAAEVGQI 5
PINALQAAMEG++VTT+EEAA I
Sbjct: 248 PINALQAAMEGYEVTTLEEAAPKANI 273
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/37 (70%), Positives = 30/37 (81%)
Frame = -2
Query: 620 LIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWK 510
L LGAEVQWSS NI+STQD AAAA+ G+P+YAWK
Sbjct: 68 LTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWK 104
Score = 50.8 bits (116), Expect = 9e-07
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -3
Query: 706 KYAPAKILKGARIAGSLHMTVQTAVLIET 620
KY P++ LKGARIAG LHMT+QTAVLIET
Sbjct: 39 KYGPSQPLKGARIAGCLHMTIQTAVLIET 67
>U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,
short chain protein25 protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.46
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -3
Query: 190 MIAGKVCVVAGYGD-VGKGCAQAFKGFGGRVIVTEIDPINALQAA 59
++ G++ VV G +GK +Q G RV+V ++D NA A
Sbjct: 4 LLGGRIAVVTGGASGIGKAISQTLAKHGARVVVADLDSGNAAATA 48
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = -1
Query: 387 PDLLKDVKGITEETTTGVHNL------YKMFREGLLKVPAINVNDSVTKSNSTTCMD 235
PDL DVK +TEE T VH+L Y R G L+ ++ ++ + N++ D
Sbjct: 316 PDLEDDVKFLTEELTLSVHDLSSYDEYYSEVRSGRLQWSPVHKSEKFWRENASKFND 372
>AF077546-2|AAC26313.2| 293|Caenorhabditis elegans Hypothetical
protein T08E11.7 protein.
Length = 293
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +2
Query: 74 VDGIDFGNDHSTAKTFERLGASFSNVTITCHYTNFPGNHYVCCPFDSVEQRLPTSIQVVE 253
VDG N + + G + + VT FPG +++ F +E L SI +E
Sbjct: 58 VDGFAELNLNGQKIKYAENGGTGTIVTFNGQEKIFPGENFISIAFKDLELLLKNSISTLE 117
Query: 254 LLFVTESLTLI 286
LF+ E + L+
Sbjct: 118 -LFMPEHVPLL 127
>U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical
protein C28F5.4 protein.
Length = 856
Score = 28.3 bits (60), Expect = 5.7
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 16/138 (11%)
Frame = +2
Query: 14 HFSGFLHSSH-LKTFHCGLKCVDGIDFGND---HSTAKT-------FERLGASFSNVTIT 160
+F GFL SS K H L ++ +DF D H+ K ++ +F T
Sbjct: 360 NFIGFLKSSGPQKWIHDELAELNAVDFRFDDVKHTMEKASILAECLHPKIRKNFETALKT 419
Query: 161 CHYT-NFPG-NHYVCCPFDSVEQRLPTSIQVVELLFVTESLTLIA---GTFKSPSRNILY 325
H+ N P N Y+ FD + R P L+ E + + + SP + I++
Sbjct: 420 SHHAFNLPEKNEYIPSKFDQ-KPREPVKSGYPRLISEDEWIQVWFKQDNEYNSPKQGIMF 478
Query: 326 KLCTPVVVSSVIPFTSFK 379
L TP+V +FK
Sbjct: 479 ALTTPLVAKKSKNVVAFK 496
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 130 GRILFQRHHNLPLHKLSRQSL 192
G I Q HH++P+H+ SR SL
Sbjct: 729 GSISAQSHHSVPVHRASRVSL 749
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 130 GRILFQRHHNLPLHKLSRQSL 192
G I Q HH++P+H+ SR SL
Sbjct: 691 GSISAQSHHSVPVHRASRVSL 711
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 426 DGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFR 310
DG T +++ + D+ K + +E T G+ NLY M R
Sbjct: 403 DGQPATCILYYRLADIFKQSSMVQQERT-GIQNLYNMVR 440
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 426 DGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFR 310
DG T +++ + D+ K + +E T G+ NLY M R
Sbjct: 426 DGQPATCILYYRLADIFKQSSMVQQERT-GIQNLYNMVR 463
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,740,130
Number of Sequences: 27780
Number of extensions: 372268
Number of successful extensions: 1083
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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