Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0552
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.93 
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    24   1.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   6.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.6  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 20  SGFLHSSHLKTFHCGLKCVDGIDF 91
           SGFL   H K +  G   VD +DF
Sbjct: 293 SGFLCERHQKRYFFGRDSVDHVDF 316


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 614 LLSLNKNRCLYCHV 655
           +L +N+NRC YC +
Sbjct: 63  ILRINRNRCQYCRL 76


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 614 LLSLNKNRCLYCHV 655
           +L +N+NRC YC +
Sbjct: 112 ILRINRNRCQYCRL 125


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 96  LPKSIPSTHFRPQWKV 49
           LP+ +P  H   +WKV
Sbjct: 506 LPQHLPRIHHDAEWKV 521


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 96  LPKSIPSTHFRPQWKV 49
           LP+ +P  H   +WKV
Sbjct: 421 LPQHLPRIHHDAEWKV 436


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 96  LPKSIPSTHFRPQWKV 49
           LP+ +P  H   +WKV
Sbjct: 740 LPQHLPRIHHDAEWKV 755


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,594
Number of Sequences: 438
Number of extensions: 4475
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)