Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0533
(483 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.48
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.48
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.1
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.1
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 23 1.1
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 22 2.6
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 22 3.4
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 22 3.4
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 21 4.5
AF263515-1|AAF74207.1| 126|Tribolium castaneum cytochrome P450 ... 21 4.5
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 21 7.9
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 21 7.9
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.48
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 403 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 272
LP DS L L V + S V LN++A++ T V + F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.48
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 403 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 272
LP DS L L V + S V LN++A++ T V + F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 403 LPADSRACLVLAVAVGRSAIVALNIIAQ 320
LP DS L L V + S V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 403 LPADSRACLVLAVAVGRSAIVALNIIAQ 320
LP DS L L V + S V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 403 LPADSRACLVLAVAVGRSAIVALNIIAQ 320
LP DS L L V + S V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 10 MLQIPTSLTTFWRSSFTIASSSPITTVRLKRA 105
+L IPT T +SSF+I+S P T + ++
Sbjct: 8 ILVIPTMARTPLKSSFSISSILPETALEAPKS 39
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 22.2 bits (45), Expect = 2.6
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 281 IKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSPRV 394
IKL+ +++ LS+D ++ + G+ KDK P++
Sbjct: 211 IKLVVEKER-EKELSDDEAEEEKKEEEGEDKDKDKPKI 247
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.8 bits (44), Expect = 3.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 305 GLALTLSNDVQGDDGRPAYGDGKDKTSPRVS 397
G TLSN + PA G GK+ T + S
Sbjct: 335 GRTFTLSNTAKFGVHAPASGGGKEGTYTKES 365
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 21.8 bits (44), Expect = 3.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 229 MSLEPWSQS**AYSMQFILLFRISLFTTFVMTSLFF 122
+S+EP S YS+ +ILLF + + + V + F+
Sbjct: 21 VSVEPTGFSPKGYSLLWILLFTLGVTISGVYRTDFY 56
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 21.4 bits (43), Expect = 4.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2
Query: 215 GLQGHRPGLFPS 250
G+ GH GL+PS
Sbjct: 215 GVTGHHSGLYPS 226
>AF263515-1|AAF74207.1| 126|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 126
Score = 21.4 bits (43), Expect = 4.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 295 VHKLNRVFGEDKSDSTGKQSR 233
VH ++R GED +TG + R
Sbjct: 62 VHYISRELGEDMVTTTGYKLR 82
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 20.6 bits (41), Expect = 7.9
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -3
Query: 163 ISLFTTFVMTSLFFSSYK 110
+++ T +T +FF+SY+
Sbjct: 152 VTIVATLTVTIIFFASYQ 169
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 20.6 bits (41), Expect = 7.9
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -3
Query: 163 ISLFTTFVMTSLFFSSYK 110
+++ T +T +FF+SY+
Sbjct: 152 VTIVATLTVTIIFFASYQ 169
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,925
Number of Sequences: 336
Number of extensions: 1583
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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