Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0509
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    24   3.4  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   3.4  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   7.9  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
 Frame = +3

Query: 129 RIHINCYTEHIGLNLYLQKT------VG*FIIKIILYCFS 230
           R+ I   TEH  +N+YL +       +  F I  ILYC S
Sbjct: 393 RVKIYLETEHTNMNIYLVQNCCQLFFMTNFGINFILYCVS 432


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 135 HINCYTEHIGLNLY 176
           ++N YTE IGLN Y
Sbjct: 221 YLNYYTEDIGLNAY 234


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 126 QRIHINCYTEHIGLNLYLQKTVG*FIIKIILYCFSEHYLL 245
           Q++   CY E  G     +  VG    K+ +  F+ H+L+
Sbjct: 369 QQLPTQCYDEQNGAPQCWETFVGQQFYKLFIVDFATHFLV 408


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,497
Number of Sequences: 2352
Number of extensions: 11888
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)