Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0509
         (617 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54216-5|CAA90946.1|   95|Caenorhabditis elegans Hypothetical pr...    62   3e-10
AC024759-8|AAK68431.1|  551|Caenorhabditis elegans Hypothetical ...    29   2.7  
AL022716-4|CAA18773.1|  703|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z54216-5|CAA90946.1|   95|Caenorhabditis elegans Hypothetical
           protein T24H10.6 protein.
          Length = 95

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 24/54 (44%), Positives = 44/54 (81%)
 Frame = +1

Query: 1   YAGLIGQLTEKARNVVREMDSTNELTFLRVRSRRHEILIAPDREFILIVIQNTS 162
           +   + QL EK +  +RE+DS+N+LTFLR+R++++EI+IAPD++ +++VI++ S
Sbjct: 42  HTAFLQQLCEKTKTSIRELDSSNDLTFLRLRTKKNEIMIAPDKDHVIMVIKDLS 95


>AC024759-8|AAK68431.1|  551|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.1 protein.
          Length = 551

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 212 YLILFFRTLFIIYWTILEPPMVIFLALRNKFS 307
           +L L+ +  F+I +  L PP+ +FL L   FS
Sbjct: 53  HLFLYVQAFFMIVFDCLSPPLFLFLLLDKLFS 84


>AL022716-4|CAA18773.1|  703|Caenorhabditis elegans Hypothetical
           protein C24F3.4 protein.
          Length = 703

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 5   LGLLDSLLRRPGMWFVKWT 61
           +GL D  + R   WFVKWT
Sbjct: 119 MGLADDNVYRESRWFVKWT 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,655,120
Number of Sequences: 27780
Number of extensions: 250675
Number of successful extensions: 492
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)