Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0501
         (417 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1QSF2 Cluster: Putative uncharacterized protein; n=1; ...    33   3.1  
UniRef50_A0MJN0 Cluster: Guanylate cyclase beta; n=11; Plasmodiu...    32   4.1  
UniRef50_Q7RWT3 Cluster: Putative uncharacterized protein NCU004...    31   7.2  
UniRef50_Q06SB1 Cluster: NADH dehydrogenase subunit 2; n=1; Hiat...    31   9.6  

>UniRef50_Q1QSF2 Cluster: Putative uncharacterized protein; n=1;
           Chromohalobacter salexigens DSM 3043|Rep: Putative
           uncharacterized protein - Chromohalobacter salexigens
           (strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
          Length = 242

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 308 FLFHHYFRWIFFWAFLGISFYRHWVLWIIWRVCVWS 415
           +LF H+  W+ +W  L +  +  W+ W+IW + V S
Sbjct: 41  YLFTHFGGWLDYW-MLKVPGWLEWLEWLIWPLLVVS 75


>UniRef50_A0MJN0 Cluster: Guanylate cyclase beta; n=11; Plasmodium
            (Vinckeia)|Rep: Guanylate cyclase beta - Plasmodium
            berghei
          Length = 2952

 Score = 32.3 bits (70), Expect = 4.1
 Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
 Frame = +2

Query: 275  IMSTSIISINCFLFHH-YFRWIFFWAFLGISFYRHWVLWII-WRVC 406
            I+S  +I +   LF H +F ++FF+ FL  SF++ +V+ +   R+C
Sbjct: 2679 IISMQLIFVKNMLFKHKFFFFVFFFVFLMYSFFKLFVIHVCELRIC 2724


>UniRef50_Q7RWT3 Cluster: Putative uncharacterized protein NCU00495.1;
            n=2; Sordariomycetes|Rep: Putative uncharacterized
            protein NCU00495.1 - Neurospora crassa
          Length = 1430

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
 Frame = +2

Query: 71   YDVLVFCQLVYNFCPDLVQSSWRGR*TDAGY-------GGDEEEAATVADGEE 208
            +D+LV  ++V     +++QS W     D          GGD EEA T +DGE+
Sbjct: 1335 HDLLVAMRVVNGIEREMIQSEWENWLADENLRCEQETNGGDNEEATTSSDGEQ 1387


>UniRef50_Q06SB1 Cluster: NADH dehydrogenase subunit 2; n=1;
           Hiatella arctica|Rep: NADH dehydrogenase subunit 2 -
           Hiatella arctica
          Length = 346

 Score = 31.1 bits (67), Expect = 9.6
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
 Frame = +2

Query: 296 SINC--FLFHHYFRWIFFWA---FLGISFY--RHWVLWIIW-RVCV 409
           SINC  ++++     IFF A   FL  SF+   +WV WIIW  +CV
Sbjct: 53  SINCGVYIYYQVMGSIFFGASCVFLNSSFFWGGNWVEWIIWVGLCV 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,679,414
Number of Sequences: 1657284
Number of extensions: 5347537
Number of successful extensions: 14977
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14959
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)