Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0501
         (417 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058524-1|AAL13753.1|  642|Drosophila melanogaster LD23072p pro...    28   5.7  
AE014297-4774|AAF57175.1|  642|Drosophila melanogaster CG1800-PA...    28   5.7  
AY060368-1|AAL25407.1|  367|Drosophila melanogaster LD22570p pro...    27   10.0 
AF172257-1|AAF87943.1|  367|Drosophila melanogaster innexin 2 pr...    27   10.0 
AF137269-1|AAD50378.1|  367|Drosophila melanogaster gap junction...    27   10.0 
AE014298-988|AAN09193.1|  367|Drosophila melanogaster CG4590-PB,...    27   10.0 
AE014298-987|AAF46229.1|  367|Drosophila melanogaster CG4590-PA,...    27   10.0 
AE013599-2526|AAF57819.2|  524|Drosophila melanogaster CG30106-P...    27   10.0 
AE013599-1723|AAF58369.1|  417|Drosophila melanogaster CG6016-PB...    27   10.0 
AE013599-1722|AAF58370.1|  417|Drosophila melanogaster CG6016-PA...    27   10.0 

>AY058524-1|AAL13753.1|  642|Drosophila melanogaster LD23072p
           protein.
          Length = 642

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +2

Query: 158 GYGGDEEEAATVADGEE 208
           G GGDEEE A   DGEE
Sbjct: 89  GEGGDEEEEAADGDGEE 105


>AE014297-4774|AAF57175.1|  642|Drosophila melanogaster CG1800-PA
           protein.
          Length = 642

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +2

Query: 158 GYGGDEEEAATVADGEE 208
           G GGDEEE A   DGEE
Sbjct: 89  GEGGDEEEEAADGDGEE 105


>AY060368-1|AAL25407.1|  367|Drosophila melanogaster LD22570p
           protein.
          Length = 367

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +2

Query: 314 FHHYFRWIFFWAFL-GISFYRHWVLWIIW 397
           +H Y++W+ F  F   I FY    LW  W
Sbjct: 105 YHKYYQWVCFVLFFQAILFYVPRYLWKSW 133


>AF172257-1|AAF87943.1|  367|Drosophila melanogaster innexin 2
           protein.
          Length = 367

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +2

Query: 314 FHHYFRWIFFWAFL-GISFYRHWVLWIIW 397
           +H Y++W+ F  F   I FY    LW  W
Sbjct: 105 YHKYYQWVCFVLFFQAILFYVPRYLWKSW 133


>AF137269-1|AAD50378.1|  367|Drosophila melanogaster gap junction
           protein prp33 protein.
          Length = 367

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +2

Query: 314 FHHYFRWIFFWAFL-GISFYRHWVLWIIW 397
           +H Y++W+ F  F   I FY    LW  W
Sbjct: 105 YHKYYQWVCFVLFFQAILFYVPRYLWKSW 133


>AE014298-988|AAN09193.1|  367|Drosophila melanogaster CG4590-PB,
           isoform B protein.
          Length = 367

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +2

Query: 314 FHHYFRWIFFWAFL-GISFYRHWVLWIIW 397
           +H Y++W+ F  F   I FY    LW  W
Sbjct: 105 YHKYYQWVCFVLFFQAILFYVPRYLWKSW 133


>AE014298-987|AAF46229.1|  367|Drosophila melanogaster CG4590-PA,
           isoform A protein.
          Length = 367

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +2

Query: 314 FHHYFRWIFFWAFL-GISFYRHWVLWIIW 397
           +H Y++W+ F  F   I FY    LW  W
Sbjct: 105 YHKYYQWVCFVLFFQAILFYVPRYLWKSW 133


>AE013599-2526|AAF57819.2|  524|Drosophila melanogaster CG30106-PA
           protein.
          Length = 524

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +2

Query: 305 CFL-FHHYFRWIFFWAFLGISFYRHWVLWIIWRVCV 409
           CFL +H +F W +FW      +   W +  I   C+
Sbjct: 319 CFLPYHVFFLWFYFWPTAQDDYNAFWHVLRIVAYCM 354


>AE013599-1723|AAF58369.1|  417|Drosophila melanogaster CG6016-PB,
           isoform B protein.
          Length = 417

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +2

Query: 299 INCFLFHHYFRWIFFWAFLGIS-FY-RHWVLWI 391
           I+C L  HY  W+FF  F  I+ FY  HW  ++
Sbjct: 140 ISCQL-GHYPNWLFFQCFCAIALFYCAHWQTYV 171


>AE013599-1722|AAF58370.1|  417|Drosophila melanogaster CG6016-PA,
           isoform A protein.
          Length = 417

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +2

Query: 299 INCFLFHHYFRWIFFWAFLGIS-FY-RHWVLWI 391
           I+C L  HY  W+FF  F  I+ FY  HW  ++
Sbjct: 140 ISCQL-GHYPNWLFFQCFCAIALFYCAHWQTYV 171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,863,975
Number of Sequences: 53049
Number of extensions: 237226
Number of successful extensions: 665
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)