Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0486
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    27   0.21 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   3.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   6.0  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   6.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   6.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   6.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.0  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.0  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   8.0  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +1

Query: 127 CVIVTSD--YLFIFLHNII*--ICNVLRLFRSIFMLTLQKLFTKSYK*IWREIKSYSTS 291
           CVIV  +  YL     N+    I N+LRL    F +T  +LFT   K ++  +  YST+
Sbjct: 258 CVIVIFELYYLSHVCQNVSTEVIGNILRLMHRRFEITALRLFTIDNKLLFGVLAYYSTT 316


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 163 LHNII*ICNVLRLFR 207
           LH I  +CNVL +F+
Sbjct: 119 LHTIFLVCNVLTVFK 133


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 447 PKNDLPWMLCHKDAKRKKN 391
           P N  PWM  H D+    N
Sbjct: 165 PANFYPWMKAHGDSSATGN 183


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 447 PKNDLPWMLCHKDAKRKKN 391
           P N  PWM  H D+    N
Sbjct: 165 PANFYPWMKAHGDSSATGN 183


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 705 NGLISYLIFRALILSV 658
           NGL+ Y +++ALI  +
Sbjct: 511 NGLVDYSLWKALIFQI 526


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 447 PKNDLPWMLCHKDAKRKKN 391
           P N  PWM  H D+    N
Sbjct: 165 PANFYPWMKAHGDSSATGN 183


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 492 PHRKESMNLWVPPDSDFY 545
           P  + + N ++PP  DF+
Sbjct: 33  PSEEYNQNSYIPPGGDFF 50


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 492 PHRKESMNLWVPPDSDFY 545
           P  + + N ++PP  DF+
Sbjct: 33  PSEEYNQNSYIPPGGDFF 50


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 546 HDTNWYIKTFGTGLRLQNIIFTANDILHPD 635
           H T +   T+   LR  +I  T + I HP+
Sbjct: 264 HGTQFISNTWQNSLRAADIQPTLSSIRHPE 293


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 492 PHRKESMNLWVPPDSDFY 545
           P  + + N ++PP  DF+
Sbjct: 33  PSEEYNQNSYIPPGGDFF 50


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 492 PHRKESMNLWVPPDSDFY 545
           P  + + N ++PP  DF+
Sbjct: 33  PSEEYNQNSYIPPGGDFF 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,778
Number of Sequences: 336
Number of extensions: 4431
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)