Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0486
         (752 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0808 - 28196563-28196735,28197369-28197440,28197540-281976...    47   1e-05
02_01_0620 + 4650572-4650671,4650755-4650891,4651012-4651205,465...    30   2.3  
05_03_0184 + 9339939-9340896,9341003-9341083,9341166-9341383,934...    28   6.9  
03_06_0049 + 31282563-31282841,31283052-31283903,31284109-312841...    28   9.2  

>04_04_0808 -
           28196563-28196735,28197369-28197440,28197540-28197666,
           28198362-28198430,28198517-28198583,28198751-28198872,
           28199302-28199412,28199596-28199661,28200156-28200213,
           28200307-28200343,28200420-28200513,28200967-28201032,
           28201139-28201203,28201352-28201496,28201925-28202074,
           28202266-28202335,28202752-28202828,28202919-28202987,
           28203798-28203881,28204018-28204061,28204172-28204273,
           28204420-28204618,28204672-28204727,28204886-28204958,
           28205685-28205771,28205863-28205976,28206985-28207092,
           28207183-28207278,28207722-28207787,28208130-28208222,
           28208429-28208512,28208961-28209078,28209191-28209267,
           28209459-28209641,28210542-28210636,28210903-28211053,
           28212218-28212325,28212513-28212612,28212788-28212840,
           28214022-28214102
          Length = 1269

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 32/87 (36%), Positives = 42/87 (48%)
 Frame = +1

Query: 241 TKSYK*IWREIKSYSTSAVNCSKMSKKKNVKTPQQIWEGVSSVSVHFVESIFFSLGIFVA 420
           TK  K    +I S +   V  S     +    P Q      SV   ++ + F   G FVA
Sbjct: 233 TKPLKNAEDKIHSSNNGKVPDSSAQVSEAASAPVQ--SAHPSVIQTYMSTFFRKHGTFVA 290

Query: 421 KHPWQVIFGTLLFVTVSCIGLIRFHIE 501
           KHP  V+F +LL  T+ CIGLIRF +E
Sbjct: 291 KHPLLVLFVSLLVPTLLCIGLIRFKVE 317


>02_01_0620 +
           4650572-4650671,4650755-4650891,4651012-4651205,
           4651287-4651571,4652111-4652169,4652469-4652540,
           4652817-4652925,4653239-4653980
          Length = 565

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +1

Query: 283 STSAVNCSKMSKKKNVKTPQQIWEGVSSVS-VHFVESIFFSLG-IFVAKHPWQVIFGTLL 456
           +T+ V   + +++K+     +++ G  ++S  H+  S+ F++  +F A   W V+FG  L
Sbjct: 44  TTTFVLAGERTRRKDPLDGLRLYSGGWNISDEHYWASVGFTVAPVFAAAAIWFVVFGVSL 103

Query: 457 FVTVSC 474
           F+   C
Sbjct: 104 FLAGCC 109


>05_03_0184 +
           9339939-9340896,9341003-9341083,9341166-9341383,
           9341796-9342019,9342409-9343096
          Length = 722

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +3

Query: 432 ASHFWDIIICYCELYRLNTVPHRK--ESMNLWV 524
           A+H W+ + C+   +R+    H+   ES+N W+
Sbjct: 535 AAHLWNELDCFSSSFRIWVTAHKSYVESLNAWL 567


>03_06_0049 +
           31282563-31282841,31283052-31283903,31284109-31284194,
           31284544-31284678,31285087-31285252
          Length = 505

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 447 DIIICYCELYRLNTVPHRKESMNLWVPPDSDFYHDTN-WYIKTFGTGLRLQNII 605
           +I  C C   R    P R      W+     + HDT  WYI+TFG   + + I+
Sbjct: 389 EISPCECRCSRARLPPSR-----YWLFEPRCYMHDTGGWYIETFGRDKKGRKIL 437


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,176,002
Number of Sequences: 37544
Number of extensions: 390470
Number of successful extensions: 862
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)