Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0481
         (626 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1554 + 27841801-27842007,27842282-27842455,27842554-278426...    36   0.026
10_01_0039 + 447573-448911,451247-451296,451322-451423                 28   7.0  

>08_02_1554 +
           27841801-27842007,27842282-27842455,27842554-27842653,
           27843273-27843725,27843936-27844469,27844500-27844580,
           27844690-27844781,27844890-27844963,27845071-27845293,
           27845429-27845522,27845607-27845761,27845899-27846129,
           27846803-27847003,27847257-27847382,27847497-27847558,
           27847775-27847892,27848040-27848324,27848475-27848513
          Length = 1082

 Score = 35.9 bits (79), Expect = 0.026
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +1

Query: 289 IEPVTSNDWEIAERNAAWLEENLLVQYRVA-TTERFIIYLPSGTFIQFQPLKLIPSSLCG 465
           IEP + +DWEI E  A   EE +L Q  V     +F ++L     ++F      P     
Sbjct: 102 IEPFSEDDWEILESRADLAEETILTQVGVVYEGMKFPLWLDGHNIVKFVVTSSSPKKSLV 161

Query: 466 RLLRTTEV 489
           +L+  TEV
Sbjct: 162 QLVPGTEV 169


>10_01_0039 + 447573-448911,451247-451296,451322-451423
          Length = 496

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 473 NRRPHKELGINLRGWNWINVPEG 405
           +RR H  L +++ G  W+++PEG
Sbjct: 292 HRRVHAYLPLSMHGRRWLHIPEG 314


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,436,216
Number of Sequences: 37544
Number of extensions: 270918
Number of successful extensions: 507
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)