Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0481
         (626 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    25   2.0  
Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.            24   3.4  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   6.0  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 513 SAIEVKENRKVNLRCVVENRLLPDSVTADSPALC 614
           +AI  +E    +L+ VVE +LLPDS+  D    C
Sbjct: 172 TAIIKREITSTDLKGVVE-KLLPDSIAKDIEKAC 204


>Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.
          Length = 143

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 506 GLGVINTSVVRNRRPHKELGINLR 435
           GLG+     +R R  H +  INL+
Sbjct: 20  GLGIYRKITIRGRMTHDQFNINLQ 43


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +1

Query: 259 DCTHEIEQLEIEPVTSNDWEIAERNAAWLEENLLVQYRVATTERFIIYLPSGTFIQFQPL 438
           DC   ++Q+++  +    WE+A R   +  E   V    A  E ++   P+  F Q Q L
Sbjct: 439 DCESALKQIDVYTLALVLWELANRCEDFYPEGTTVPEYRAPYEEYVGSNPN--FEQMQVL 496


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,429
Number of Sequences: 2352
Number of extensions: 11864
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)