Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0481
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis f... 57 6e-08
AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis g... 57 6e-08
AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis d... 57 6e-08
AB052094-1|BAB59065.1| 260|Homo sapiens Pex1pQ261Ter protein. 57 6e-08
AB052093-1|BAB59064.1| 632|Homo sapiens Pex1pR633Ter protein. 57 6e-08
AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein. 57 6e-08
AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein. 57 6e-08
AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein. 57 6e-08
AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein. 57 6e-08
AY946008-1|AAY23347.1| 1841|Homo sapiens peripheral clock protei... 31 3.3
BC036573-1|AAH36573.1| 295|Homo sapiens ankyrin repeat and SOCS... 30 7.7
BC022517-1|AAH22517.1| 139|Homo sapiens ASB17 protein protein. 30 7.7
AL445464-1|CAH71811.1| 295|Homo sapiens ankyrin repeat and SOCS... 30 7.7
AK098606-1|BAC05350.1| 295|Homo sapiens protein ( Homo sapiens ... 30 7.7
AF429968-1|AAN85310.1| 295|Homo sapiens hypothetical protein pr... 30 7.7
AF403035-1|AAL57354.1| 231|Homo sapiens ankyrin repeat domain-c... 30 7.7
>BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis
factor 1 protein.
Length = 1283
Score = 56.8 bits (131), Expect = 6e-08
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +1
Query: 247 FIKIDCTHEI--EQLEIEPVTSNDWEIAERNAAWLEENLLVQYRVATTER-FIIYLPSGT 417
F+K C+H + +Q+E+EP++++DWEI E +A LE++LL Q R+ + F +++ T
Sbjct: 93 FLK-PCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPVWVDQQT 151
Query: 418 FIQFQPLKLIPSSLCGRLLRTTEV 489
+I Q + LIP++ GRL T++
Sbjct: 152 YIFIQIVALIPAASYGRLETDTKL 175
>AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis gene
1 protein.
Length = 1283
Score = 56.8 bits (131), Expect = 6e-08
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +1
Query: 247 FIKIDCTHEI--EQLEIEPVTSNDWEIAERNAAWLEENLLVQYRVATTER-FIIYLPSGT 417
F+K C+H + +Q+E+EP++++DWEI E +A LE++LL Q R+ + F +++ T
Sbjct: 93 FLK-PCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPVWVDQQT 151
Query: 418 FIQFQPLKLIPSSLCGRLLRTTEV 489
+I Q + LIP++ GRL T++
Sbjct: 152 YIFIQIVALIPAASYGRLETDTKL 175
>AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis
disorder protein 1 protein.
Length = 1283
Score = 56.8 bits (131), Expect = 6e-08
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +1
Query: 247 FIKIDCTHEI--EQLEIEPVTSNDWEIAERNAAWLEENLLVQYRVATTER-FIIYLPSGT 417
F+K C+H + +Q+E+EP++++DWEI E +A LE++LL Q R+ + F +++ T
Sbjct: 93 FLK-PCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPVWVDQQT 151
Query: 418 FIQFQPLKLIPSSLCGRLLRTTEV 489
+I Q + LIP++ GRL T++
Sbjct: 152 YIFIQIVALIPAASYGRLETDTKL 175
>AB052094-1|BAB59065.1| 260|Homo sapiens Pex1pQ261Ter protein.
Length = 260
Score = 56.8 bits (131), Expect = 6e-08
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +1
Query: 247 FIKIDCTHEI--EQLEIEPVTSNDWEIAERNAAWLEENLLVQYRVATTER-FIIYLPSGT 417
F+K C+H + +Q+E+EP++++DWEI E +A LE++LL Q R+ + F +++ T
Sbjct: 93 FLK-PCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPVWVDQQT 151
Query: 418 FIQFQPLKLIPSSLCGRLLRTTEV 489
+I Q + LIP++ GRL T++
Sbjct: 152 YIFIQIVALIPAASYGRLETDTKL 175
>AB052093-1|BAB59064.1| 632|Homo sapiens Pex1pR633Ter protein.
Length = 632
Score = 56.8 bits (131), Expect = 6e-08
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +1
Query: 247 FIKIDCTHEI--EQLEIEPVTSNDWEIAERNAAWLEENLLVQYRVATTER-FIIYLPSGT 417
F+K C+H + +Q+E+EP++++DWEI E +A LE++LL Q R+ + F +++ T
Sbjct: 93 FLK-PCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPVWVDQQT 151
Query: 418 FIQFQPLKLIPSSLCGRLLRTTEV 489
+I Q + LIP++ GRL T++
Sbjct: 152 YIFIQIVALIPAASYGRLETDTKL 175
>AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein.
Length = 1283
Score = 56.8 bits (131), Expect = 6e-08
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +1
Query: 247 FIKIDCTHEI--EQLEIEPVTSNDWEIAERNAAWLEENLLVQYRVATTER-FIIYLPSGT 417
F+K C+H + +Q+E+EP++++DWEI E +A LE++LL Q R+ + F +++ T
Sbjct: 93 FLK-PCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPVWVDQQT 151
Query: 418 FIQFQPLKLIPSSLCGRLLRTTEV 489
+I Q + LIP++ GRL T++
Sbjct: 152 YIFIQIVALIPAASYGRLETDTKL 175
>AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein.
Length = 1283
Score = 56.8 bits (131), Expect = 6e-08
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +1
Query: 247 FIKIDCTHEI--EQLEIEPVTSNDWEIAERNAAWLEENLLVQYRVATTER-FIIYLPSGT 417
F+K C+H + +Q+E+EP++++DWEI E +A LE++LL Q R+ + F +++ T
Sbjct: 93 FLK-PCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPVWVDQQT 151
Query: 418 FIQFQPLKLIPSSLCGRLLRTTEV 489
+I Q + LIP++ GRL T++
Sbjct: 152 YIFIQIVALIPAASYGRLETDTKL 175
>AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein.
Length = 1226
Score = 56.8 bits (131), Expect = 6e-08
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +1
Query: 247 FIKIDCTHEI--EQLEIEPVTSNDWEIAERNAAWLEENLLVQYRVATTER-FIIYLPSGT 417
F+K C+H + +Q+E+EP++++DWEI E +A LE++LL Q R+ + F +++ T
Sbjct: 93 FLK-PCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPVWVDQQT 151
Query: 418 FIQFQPLKLIPSSLCGRLLRTTEV 489
+I Q + LIP++ GRL T++
Sbjct: 152 YIFIQIVALIPAASYGRLETDTKL 175
>AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein.
Length = 1283
Score = 56.8 bits (131), Expect = 6e-08
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +1
Query: 247 FIKIDCTHEI--EQLEIEPVTSNDWEIAERNAAWLEENLLVQYRVATTER-FIIYLPSGT 417
F+K C+H + +Q+E+EP++++DWEI E +A LE++LL Q R+ + F +++ T
Sbjct: 93 FLK-PCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPKAIFPVWVDQQT 151
Query: 418 FIQFQPLKLIPSSLCGRLLRTTEV 489
+I Q + LIP++ GRL T++
Sbjct: 152 YIFIQIVALIPAASYGRLETDTKL 175
>AY946008-1|AAY23347.1| 1841|Homo sapiens peripheral clock protein 2
protein.
Length = 1841
Score = 31.1 bits (67), Expect = 3.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 528 KENRKVNLRCVVENRLLPDSVTADSP 605
KE +K L+C EN L+ D+ +AD+P
Sbjct: 1485 KEKKKPELQCETENELIKDTKSADNP 1510
>BC036573-1|AAH36573.1| 295|Homo sapiens ankyrin repeat and SOCS
box-containing 17 protein.
Length = 295
Score = 29.9 bits (64), Expect = 7.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 181 SRKSRGKNICQQ*NVFTNLLDKFIK 255
S K GK C + N+F NLLDK +K
Sbjct: 4 STKLCGKTSCPRSNIFCNLLDKIVK 28
>BC022517-1|AAH22517.1| 139|Homo sapiens ASB17 protein protein.
Length = 139
Score = 29.9 bits (64), Expect = 7.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 181 SRKSRGKNICQQ*NVFTNLLDKFIK 255
S K GK C + N+F NLLDK +K
Sbjct: 4 STKLCGKTSCPRSNIFCNLLDKIVK 28
>AL445464-1|CAH71811.1| 295|Homo sapiens ankyrin repeat and SOCS
box-containing 17 protein.
Length = 295
Score = 29.9 bits (64), Expect = 7.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 181 SRKSRGKNICQQ*NVFTNLLDKFIK 255
S K GK C + N+F NLLDK +K
Sbjct: 4 STKLCGKTSCPRSNIFCNLLDKIVK 28
>AK098606-1|BAC05350.1| 295|Homo sapiens protein ( Homo sapiens
cDNA FLJ25740 fis, clone TST05846. ).
Length = 295
Score = 29.9 bits (64), Expect = 7.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 181 SRKSRGKNICQQ*NVFTNLLDKFIK 255
S K GK C + N+F NLLDK +K
Sbjct: 4 STKLCGKTSCPRSNIFCNLLDKIVK 28
>AF429968-1|AAN85310.1| 295|Homo sapiens hypothetical protein
protein.
Length = 295
Score = 29.9 bits (64), Expect = 7.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 181 SRKSRGKNICQQ*NVFTNLLDKFIK 255
S K GK C + N+F NLLDK +K
Sbjct: 4 STKLCGKTSCPRSNIFCNLLDKIVK 28
>AF403035-1|AAL57354.1| 231|Homo sapiens ankyrin repeat
domain-containing SOCS box protein Asb-17 protein.
Length = 231
Score = 29.9 bits (64), Expect = 7.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 181 SRKSRGKNICQQ*NVFTNLLDKFIK 255
S K GK C + N+F NLLDK +K
Sbjct: 4 STKLCGKTSCPRSNIFCNLLDKIVK 28
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,085,897
Number of Sequences: 237096
Number of extensions: 1522248
Number of successful extensions: 2882
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2873
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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