Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0481
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.60 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.60 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.6  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   7.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.8  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +1

Query: 304 SNDWEIAERNAAWLEENLLVQYRVATTERFIIYLPSGTFIQFQPL 438
           + D++I  + A W + N+     + +    +I  P   FIQ  PL
Sbjct: 118 AKDFDIFFKTALWAKNNINEAQYIYSLYTAVITRPDTKFIQLPPL 162


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +1

Query: 304 SNDWEIAERNAAWLEENLLVQYRVATTERFIIYLPSGTFIQFQPL 438
           + D++I  + A W + N+     + +    +I  P   FIQ  PL
Sbjct: 118 AKDFDIFFKTALWAKNNINEAQYIYSLYTAVITRPDTKFIQLPPL 162


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 507 HTSAIEVKENRKVNLRCVVENRLLPDSVTADSPALCVC 620
           + + IE  E   + L  V E+R LP+     +P  C C
Sbjct: 649 YANMIETMELTSLLLTKVAEDRPLPEFYIGGNPFNCNC 686


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 458 KELGINLRGWNW 423
           +++GINL  W+W
Sbjct: 201 EDIGINLHHWHW 212


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 83  KNDIKKTFYFGISGIPSQFS 142
           +ND+    Y GIS  PSQ S
Sbjct: 305 RNDLDLEKYEGISSTPSQAS 324


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +3

Query: 354 SFSTISCSYHREIYYLSSFRYIYPIP 431
           ++  + C+ +R++YY  ++    PIP
Sbjct: 95  NYKKLYCNNYRKLYYNINYIEQIPIP 120


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 107 KMFSLYRFYKLQPE 66
           K F  ++FYK QP+
Sbjct: 187 KQFYFHQFYKQQPD 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,874
Number of Sequences: 438
Number of extensions: 3184
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)