Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0420
         (697 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC071556-1|AAH71556.1| 1244|Homo sapiens TTBK2 protein protein.        30   6.9  
AK131372-1|BAD18523.1| 1167|Homo sapiens protein ( Homo sapiens ...    30   6.9  
AF525400-1|AAO14996.1| 1649|Homo sapiens tau-tubulin kinase prot...    30   6.9  
AB020654-1|BAA74870.1|  645|Homo sapiens KIAA0847 protein protein.     30   6.9  

>BC071556-1|AAH71556.1| 1244|Homo sapiens TTBK2 protein protein.
          Length = 1244

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 23/54 (42%), Positives = 27/54 (50%)
 Frame = +2

Query: 113  SSNEPIIAGRSRSKPLHDAL*GLRIFLMSTRTVNESGSSSSKRSCQYLSEVCQP 274
            SS+ P  AGR    P HD          S    + SGSSSS+RSCQ   E C+P
Sbjct: 1164 SSSSPSRAGR----PHHDQRSSSPHLGRSKSPPSHSGSSSSRRSCQ--QEHCKP 1211


>AK131372-1|BAD18523.1| 1167|Homo sapiens protein ( Homo sapiens cDNA
            FLJ16421 fis, clone BRACE3003920, weakly  similar to
            Serine/threonine-protein kinase K06H7.1 in chromosome III
            (EC 2.7.1.-). ).
          Length = 1167

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 23/54 (42%), Positives = 27/54 (50%)
 Frame = +2

Query: 113  SSNEPIIAGRSRSKPLHDAL*GLRIFLMSTRTVNESGSSSSKRSCQYLSEVCQP 274
            SS+ P  AGR    P HD          S    + SGSSSS+RSCQ   E C+P
Sbjct: 1095 SSSSPSRAGR----PHHDQRSSSPHLGRSKSPPSHSGSSSSRRSCQ--QEHCKP 1142


>AF525400-1|AAO14996.1| 1649|Homo sapiens tau-tubulin kinase protein.
          Length = 1649

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 23/54 (42%), Positives = 27/54 (50%)
 Frame = +2

Query: 113  SSNEPIIAGRSRSKPLHDAL*GLRIFLMSTRTVNESGSSSSKRSCQYLSEVCQP 274
            SS+ P  AGR    P HD          S    + SGSSSS+RSCQ   E C+P
Sbjct: 1569 SSSSPSRAGR----PHHDQRSSSPHLGRSKSPPSHSGSSSSRRSCQ--QEHCKP 1616


>AB020654-1|BAA74870.1|  645|Homo sapiens KIAA0847 protein protein.
          Length = 645

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 23/54 (42%), Positives = 27/54 (50%)
 Frame = +2

Query: 113 SSNEPIIAGRSRSKPLHDAL*GLRIFLMSTRTVNESGSSSSKRSCQYLSEVCQP 274
           SS+ P  AGR    P HD          S    + SGSSSS+RSCQ   E C+P
Sbjct: 565 SSSSPSRAGR----PHHDQRSSSPHLGRSKSPPSHSGSSSSRRSCQ--QEHCKP 612


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,375,536
Number of Sequences: 237096
Number of extensions: 1872217
Number of successful extensions: 3480
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3480
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)