Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0413
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97053-3|CAB09783.1|  473|Homo sapiens serine incorporator 3 pro...    31   2.9  
Z97053-2|CAI19683.1|  212|Homo sapiens serine incorporator 3 pro...    31   2.9  
BC006088-1|AAH06088.1|  473|Homo sapiens serine incorporator 3 p...    31   2.9  
AF112227-1|AAD22448.1|  473|Homo sapiens TDE homolog protein.          31   2.9  

>Z97053-3|CAB09783.1|  473|Homo sapiens serine incorporator 3
           protein.
          Length = 473

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +3

Query: 153 SIIHIHVCQ---FIMFILCEWTRTCAQY*SLTKMYDSASILIVDKTVCVDVDVWTV 311
           S+ H+ +C    +IM  L  W    A++ S+T  + +  + I    VC+ + VWT+
Sbjct: 406 SLFHLMLCLASLYIMMTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTL 461


>Z97053-2|CAI19683.1|  212|Homo sapiens serine incorporator 3
           protein.
          Length = 212

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +3

Query: 153 SIIHIHVCQ---FIMFILCEWTRTCAQY*SLTKMYDSASILIVDKTVCVDVDVWTV 311
           S+ H+ +C    +IM  L  W    A++ S+T  + +  + I    VC+ + VWT+
Sbjct: 145 SLFHLMLCLASLYIMMTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTL 200


>BC006088-1|AAH06088.1|  473|Homo sapiens serine incorporator 3
           protein.
          Length = 473

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +3

Query: 153 SIIHIHVCQ---FIMFILCEWTRTCAQY*SLTKMYDSASILIVDKTVCVDVDVWTV 311
           S+ H+ +C    +IM  L  W    A++ S+T  + +  + I    VC+ + VWT+
Sbjct: 406 SLFHLMLCLASLYIMMTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTL 461


>AF112227-1|AAD22448.1|  473|Homo sapiens TDE homolog protein.
          Length = 473

 Score = 31.5 bits (68), Expect = 2.9
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +3

Query: 153 SIIHIHVCQ---FIMFILCEWTRTCAQY*SLTKMYDSASILIVDKTVCVDVDVWTV 311
           S+ H+ +C    +IM  L  W    A++ S+T  + +  + I    VC+ + VWT+
Sbjct: 406 SLFHLMLCLASLYIMMTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTL 461


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,689,158
Number of Sequences: 237096
Number of extensions: 1748866
Number of successful extensions: 6997
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6997
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)