Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0409
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    27   0.16 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    27   0.16 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   5.9  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
 Frame = -2

Query: 582 LFFYLRLVLRFCIDHWFMKSMMRYIV*NNS-CQLYKWQRLTQL*RYLTEVVNKFIVYKYN 406
           L+    LVL + +D + + ++   ++ N+  C   KW RL    +Y+ EV+     ++ N
Sbjct: 72  LYTITHLVLDY-LDEFLIVALAFQVILNSCFCDPAKWIRLNNNLQYIDEVLKNRDSHETN 130

Query: 405 QFRLVTTLHPIFYYLLVRSNFYYSHHNNLKMLDVNGIYCITMNIIR*LFTL*YILLKYN 229
             R V+    ++  L + +  + ++    +M  V  +   T+++   L+ +    L YN
Sbjct: 131 LLRNVSVQFFVYVILYILATVFLAYVWICEM-GVVTLQAYTLHLFCVLYVVLLHFLTYN 188


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 25/119 (21%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
 Frame = -2

Query: 582 LFFYLRLVLRFCIDHWFMKSMMRYIV*NNS-CQLYKWQRLTQL*RYLTEVVNKFIVYKYN 406
           L+    LVL + +D + + ++   ++ N+  C   KW RL    +Y+ EV+     ++ N
Sbjct: 72  LYTITHLVLDY-LDEFLIVALAFQVILNSCFCDPAKWIRLNNNLQYIDEVLKNRDSHETN 130

Query: 405 QFRLVTTLHPIFYYLLVRSNFYYSHHNNLKMLDVNGIYCITMNIIR*LFTL*YILLKYN 229
             R V+    ++  L + +  + ++    +M  V  +   T+++   L+ +    L YN
Sbjct: 131 LLRNVSVQFFVYVILYILATVFLAYVWICEM-GVVTLQAYTLHLFCVLYVVLLHFLTYN 188


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 189 GIYRNLVLKCITIILVFYFH 130
           GI  +LV KC  +  ++YF+
Sbjct: 41  GILDSLVFKCYNLRRIYYFY 60


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 40  FFGNKPIVQT 69
           FFGNKP++ T
Sbjct: 180 FFGNKPVILT 189


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 10  CASTFLNTRNFFGNKPIVQTTNI 78
           C  T     N+FGNK I    NI
Sbjct: 270 CGITVSQVSNWFGNKRIRYKKNI 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,578
Number of Sequences: 336
Number of extensions: 3366
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)