Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0409
         (736 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001568-1|AAN71323.1|  952|Drosophila melanogaster RE20510p pro...    25   9.5  
AE014297-1758|AAN13592.1|  952|Drosophila melanogaster CG9297-PB...    25   9.5  
BT023806-1|AAZ66313.1|  930|Drosophila melanogaster RE64894p pro...    25   9.6  
BT012451-1|AAS93722.1|  930|Drosophila melanogaster RE64616p pro...    25   9.6  
AY128495-1|AAM75088.1|  930|Drosophila melanogaster RH42893p pro...    25   9.6  
AE014297-1759|AAF54988.1|  930|Drosophila melanogaster CG9297-PA...    25   9.6  

>BT001568-1|AAN71323.1|  952|Drosophila melanogaster RE20510p
           protein.
          Length = 952

 Score = 25.0 bits (52), Expect(2) = 9.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 34  RNFFGNKPIVQTTNIKDTCIFF 99
           R+FF   P+ +   ++DTC +F
Sbjct: 879 RDFFRLNPLYEFKKLRDTCTYF 900



 Score = 21.8 bits (44), Expect(2) = 9.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 7   CCASTFLNTRNFFGNK 54
           C  +TF N +  FGNK
Sbjct: 826 CYLNTFNNHKTLFGNK 841


>AE014297-1758|AAN13592.1|  952|Drosophila melanogaster CG9297-PB,
           isoform B protein.
          Length = 952

 Score = 25.0 bits (52), Expect(2) = 9.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 34  RNFFGNKPIVQTTNIKDTCIFF 99
           R+FF   P+ +   ++DTC +F
Sbjct: 879 RDFFRLNPLYEFKKLRDTCTYF 900



 Score = 21.8 bits (44), Expect(2) = 9.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 7   CCASTFLNTRNFFGNK 54
           C  +TF N +  FGNK
Sbjct: 826 CYLNTFNNHKTLFGNK 841


>BT023806-1|AAZ66313.1|  930|Drosophila melanogaster RE64894p
           protein.
          Length = 930

 Score = 25.0 bits (52), Expect(2) = 9.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 34  RNFFGNKPIVQTTNIKDTCIFF 99
           R+FF   P+ +   ++DTC +F
Sbjct: 857 RDFFRLNPLYEFKKLRDTCTYF 878



 Score = 21.8 bits (44), Expect(2) = 9.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 7   CCASTFLNTRNFFGNK 54
           C  +TF N +  FGNK
Sbjct: 804 CYLNTFNNHKTLFGNK 819


>BT012451-1|AAS93722.1|  930|Drosophila melanogaster RE64616p
           protein.
          Length = 930

 Score = 25.0 bits (52), Expect(2) = 9.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 34  RNFFGNKPIVQTTNIKDTCIFF 99
           R+FF   P+ +   ++DTC +F
Sbjct: 857 RDFFRLNPLYEFKKLRDTCTYF 878



 Score = 21.8 bits (44), Expect(2) = 9.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 7   CCASTFLNTRNFFGNK 54
           C  +TF N +  FGNK
Sbjct: 804 CYLNTFNNHKTLFGNK 819


>AY128495-1|AAM75088.1|  930|Drosophila melanogaster RH42893p
           protein.
          Length = 930

 Score = 25.0 bits (52), Expect(2) = 9.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 34  RNFFGNKPIVQTTNIKDTCIFF 99
           R+FF   P+ +   ++DTC +F
Sbjct: 857 RDFFRLNPLYEFKKLRDTCTYF 878



 Score = 21.8 bits (44), Expect(2) = 9.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 7   CCASTFLNTRNFFGNK 54
           C  +TF N +  FGNK
Sbjct: 804 CYLNTFNNHKTLFGNK 819


>AE014297-1759|AAF54988.1|  930|Drosophila melanogaster CG9297-PA,
           isoform A protein.
          Length = 930

 Score = 25.0 bits (52), Expect(2) = 9.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 34  RNFFGNKPIVQTTNIKDTCIFF 99
           R+FF   P+ +   ++DTC +F
Sbjct: 857 RDFFRLNPLYEFKKLRDTCTYF 878



 Score = 21.8 bits (44), Expect(2) = 9.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 7   CCASTFLNTRNFFGNK 54
           C  +TF N +  FGNK
Sbjct: 804 CYLNTFNNHKTLFGNK 819


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,086,779
Number of Sequences: 53049
Number of extensions: 501599
Number of successful extensions: 738
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)