Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0406
(494 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 28 0.053
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 23 2.0
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 23 2.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 2.0
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 22 3.5
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 21 4.6
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 4.6
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 8.1
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 21 8.1
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 27.9 bits (59), Expect = 0.053
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 439 GGNWLGQSADTKYCSCSVAVVRR--PLQELCS 350
G W G+ D + SC A +R+ PL++LC+
Sbjct: 126 GVGWTGKVCDVEMVSCKDAALRKVVPLKKLCN 157
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 22.6 bits (46), Expect = 2.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 219 PPVQPDRCALSGTIVLSPTR 278
PP + CA +++SPTR
Sbjct: 226 PPNTENNCAQPVVVIMSPTR 245
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 22.6 bits (46), Expect = 2.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 340 CPRCYRVLEVVA*LRLHYK 396
C C+RVL + L++HY+
Sbjct: 137 CVICHRVLSCKSALQMHYR 155
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 311 WLLPVAISRVLPGWTQD 261
W++P+AI V GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 311 WLLPVAISRVLPGWTQD 261
W++P+AI V GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 311 WLLPVAISRVLPGWTQD 261
W++P+AI V GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 311 WLLPVAISRVLPGWTQD 261
W++P+AI V GW ++
Sbjct: 254 WIIPIAIFLVSLGWWEN 270
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 21.8 bits (44), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 291 YRHWQQPL 314
YRHWQ PL
Sbjct: 344 YRHWQIPL 351
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.4 bits (43), Expect = 4.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +3
Query: 39 RYQAFPPGSSLVRSPVPTLPLTGY 110
RY + +S++ P P +P G+
Sbjct: 225 RYNPYLQAASMLPKPTPLVPQQGF 248
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.4 bits (43), Expect = 4.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 426 SQLPPEKESVALDPADKP 479
S PPE+E+ + P D P
Sbjct: 44 SPAPPEEEAASPTPGDVP 61
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 20.6 bits (41), Expect = 8.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 119 GGQVSGKRQGRNRRAHEGASRGK 51
GGQV G R G SRGK
Sbjct: 440 GGQVKYPLIGAMREELRGISRGK 462
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 20.6 bits (41), Expect = 8.1
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -2
Query: 406 KYCSCSVAVVRRPLQELCSTADIPRSANPVTSG 308
KYC+ + L A + + NPVT+G
Sbjct: 320 KYCNFIILFYLSVFVILVYYASLDETPNPVTNG 352
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,061
Number of Sequences: 336
Number of extensions: 2738
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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