Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0406
         (494 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.           31   1.7  
BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.        30   3.8  
BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.        30   3.8  
AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.       30   3.8  
Y11192-1|CAA72076.1|  535|Homo sapiens succinic semialdehyde deh...    29   8.9  
CR457371-1|CAG33652.1|  225|Homo sapiens PREI3 protein.                29   8.9  
BC072021-1|AAH72021.1|  227|Homo sapiens CTBP1 protein protein.        29   8.9  
BC034321-1|AAH34321.1|  535|Homo sapiens aldehyde dehydrogenase ...    29   8.9  
BC005237-1|AAH05237.1|  225|Homo sapiens preimplantation protein...    29   8.9  
AL080070-1|CAB45697.1|  194|Homo sapiens hypothetical protein pr...    29   8.9  
AL031230-4|CAA20248.1|  535|Homo sapiens aldehyde dehydrogenase ...    29   8.9  
AJ580638-1|CAE45270.1|  225|Homo sapiens Mob1 protein protein.         29   8.9  
AJ427355-1|CAD20884.1|  535|Homo sapiens succinic semialdehyde d...    29   8.9  
AF250319-1|AAG44567.1|  193|Homo sapiens CGI95-iso protein.            29   8.9  
AF151853-1|AAD34090.1|  225|Homo sapiens CGI-95 protein protein.       29   8.9  
AF093825-1|AAP97221.1|  223|Homo sapiens 2C4D protein.                 29   8.9  
AC020550-2|AAX93147.1|  225|Homo sapiens unknown protein.              29   8.9  
AB015441-1|BAB19057.1|  225|Homo sapiens Mob3 protein.                 29   8.9  

>AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.
          Length = 326

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +3

Query: 69  LVRSPVPTLPLTGYLSAFLPSGSVALSHS 155
           + R PV T+P+   L AF   GSV LSHS
Sbjct: 161 IFRGPVATIPIVLLLKAFPYCGSVVLSHS 189


>BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.
          Length = 299

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 125 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 6
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAAT 41


>BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.
          Length = 293

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 125 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 6
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAAT 41


>AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.
          Length = 482

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 125 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 6
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAAT 41


>Y11192-1|CAA72076.1|  535|Homo sapiens succinic semialdehyde
           dehydrogenase precursor protein.
          Length = 535

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = -2

Query: 478 GLSAGSRATDSFSGGNWLGQSADTKYCSCSVAVVRRPLQELCSTADIPRSANPVTSGCCQ 299
           GLSA    TDSF GG WL  +A       +       + + C   +   +        C+
Sbjct: 53  GLSAALLRTDSFVGGRWLPAAATFPVQDPASGAALGMVAD-CGVREARAAVRAAYEAFCR 111

Query: 298 WR 293
           WR
Sbjct: 112 WR 113


>CR457371-1|CAG33652.1|  225|Homo sapiens PREI3 protein.
          Length = 225

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 34  YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 156
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


>BC072021-1|AAH72021.1|  227|Homo sapiens CTBP1 protein protein.
          Length = 227

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = -1

Query: 155 AMRKRHAS-RREKGGQVSGKRQGR-NRRAHEGASR 57
           A   RH   + + GG+ SG+R+GR  RRA  GA+R
Sbjct: 3   AAETRHGGGQAQAGGRSSGRRRGRPTRRARGGAAR 37


>BC034321-1|AAH34321.1|  535|Homo sapiens aldehyde dehydrogenase 5
           family, member A1 (succinate-semialdehyde dehydrogenas
           protein.
          Length = 535

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = -2

Query: 478 GLSAGSRATDSFSGGNWLGQSADTKYCSCSVAVVRRPLQELCSTADIPRSANPVTSGCCQ 299
           GLSA    TDSF GG WL  +A       +       + + C   +   +        C+
Sbjct: 53  GLSAALLRTDSFVGGRWLPAAATFPVQDPASGAALGMVAD-CGVREARAAVRAAYEAFCR 111

Query: 298 WR 293
           WR
Sbjct: 112 WR 113


>BC005237-1|AAH05237.1|  225|Homo sapiens preimplantation protein 3
           protein.
          Length = 225

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 34  YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 156
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


>AL080070-1|CAB45697.1|  194|Homo sapiens hypothetical protein
           protein.
          Length = 194

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 34  YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 156
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


>AL031230-4|CAA20248.1|  535|Homo sapiens aldehyde dehydrogenase 5
           family, member A1 (succinate-semialdehyde dehydrogenas
           protein.
          Length = 535

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = -2

Query: 478 GLSAGSRATDSFSGGNWLGQSADTKYCSCSVAVVRRPLQELCSTADIPRSANPVTSGCCQ 299
           GLSA    TDSF GG WL  +A       +       + + C   +   +        C+
Sbjct: 53  GLSAALLRTDSFVGGRWLPAAATFPVQDPASGAALGMVAD-CGVREARAAVRAAYEAFCR 111

Query: 298 WR 293
           WR
Sbjct: 112 WR 113


>AJ580638-1|CAE45270.1|  225|Homo sapiens Mob1 protein protein.
          Length = 225

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 34  YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 156
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


>AJ427355-1|CAD20884.1|  535|Homo sapiens succinic semialdehyde
           dehydrogenase precursor protein.
          Length = 535

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = -2

Query: 478 GLSAGSRATDSFSGGNWLGQSADTKYCSCSVAVVRRPLQELCSTADIPRSANPVTSGCCQ 299
           GLSA    TDSF GG WL  +A       +       + + C   +   +        C+
Sbjct: 53  GLSAALLRTDSFVGGRWLPAAATFPVQDPASGAALGMVAD-CGVREARAAVRAAYEAFCR 111

Query: 298 WR 293
           WR
Sbjct: 112 WR 113


>AF250319-1|AAG44567.1|  193|Homo sapiens CGI95-iso protein.
          Length = 193

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 34  YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 156
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 39  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 79


>AF151853-1|AAD34090.1|  225|Homo sapiens CGI-95 protein protein.
          Length = 225

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 34  YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 156
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


>AF093825-1|AAP97221.1|  223|Homo sapiens 2C4D protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 34  YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 156
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 69  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 109


>AC020550-2|AAX93147.1|  225|Homo sapiens unknown protein.
          Length = 225

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 34  YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 156
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


>AB015441-1|BAB19057.1|  225|Homo sapiens Mob3 protein.
          Length = 225

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 34  YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 156
           Y+  R+F LE    A+  +    PDTC   +  E W FL A
Sbjct: 71  YEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCA 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,846,446
Number of Sequences: 237096
Number of extensions: 1965662
Number of successful extensions: 9704
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9703
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)