Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0405
(737 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 27 0.14
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 26 0.42
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 4.0
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 22 5.2
AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein. 22 5.2
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 22 6.9
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 22 6.9
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 6.9
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 22 6.9
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 9.1
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 9.1
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 9.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 9.1
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 27.5 bits (58), Expect = 0.14
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 517 ELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQ 666
+L L+V +T++ KK S L ++ + +QLQ+T QY + Q
Sbjct: 152 QLQLNVIQQTHLLQTADKKKASAPLQQLALQQQRLIQQLQITQSQYLLQQ 201
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 25.8 bits (54), Expect = 0.42
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 175 HHASHHPFSCFRGRGRLSVRESEIPRIAARLSLNA 71
HH + H +CF RG L + E ++ L L+A
Sbjct: 371 HHLARHAVACFLTRGDLWISWEEGMKVFDELLLDA 405
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +1
Query: 88 EQQYEESQTREQKDALARENKKMGDDLHDARA 183
+QQ ++ Q ++Q+ ARE + +G + + A
Sbjct: 1220 QQQQQQQQQQQQQQHQAREREGVGAGIAETSA 1251
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 104 NLRLANRKTPSPAKTRK 154
NL +NRK P+PA +K
Sbjct: 384 NLDPSNRKLPAPANWKK 400
>AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein.
Length = 50
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 470 EVTRIKKKLQIQILNWNSLLMW 535
+V ++KKK + + LN N +++W
Sbjct: 2 KVHQLKKKRRKKNLNQNQMMIW 23
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 21.8 bits (44), Expect = 6.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 52 QLRAGPTR*GSVEQQYEESQTREQKDALARENKKMG 159
QL G + S E Y E++ E K ++ KK+G
Sbjct: 74 QLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIG 109
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 21.8 bits (44), Expect = 6.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 52 QLRAGPTR*GSVEQQYEESQTREQKDALARENKKMG 159
QL G + S E Y E++ E K ++ KK+G
Sbjct: 90 QLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIG 125
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 52 QLRAGPTR*GSVEQQYEESQTREQKDALARENKKMG 159
QL G + S E Y E++ E K ++ KK+G
Sbjct: 147 QLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIG 182
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.8 bits (44), Expect = 6.9
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +1
Query: 91 QQYEESQTREQKDALARENKKMG 159
QQ ++ Q ++Q+D ++ +MG
Sbjct: 89 QQQQQQQQQQQQDQQQQQQSRMG 111
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 361 SSAREGRRNRSHPQADKHRNRTAERSR 441
S RE ++ + K+R R+ ERSR
Sbjct: 42 SREREQNSYKNEKEYRKYRERSKERSR 68
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 361 SSAREGRRNRSHPQADKHRNRTAERSR 441
S RE ++ + K+R R+ ERSR
Sbjct: 42 SREREQNSYKNEKEYRKYRERSKERSR 68
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 361 SSAREGRRNRSHPQADKHRNRTAERSR 441
S RE + ++ + K+R R+ ERSR
Sbjct: 42 SREREQKSYKNERKYRKYRERSKERSR 68
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 9.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 361 SSAREGRRNRSHPQADKHRNRTAERSR 441
S RE + ++ + K+R R+ ERSR
Sbjct: 42 SREREQKSYKNERKYRKYRERSKERSR 68
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,319
Number of Sequences: 438
Number of extensions: 3009
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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