Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0404
(827 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 52 8e-07
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 39 0.004
SB_29745| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.04) 36 0.053
SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 34 0.16
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.37
SB_55959| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_2494| Best HMM Match : M (HMM E-Value=0.0056) 32 0.65
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_12493| Best HMM Match : RrnaAD (HMM E-Value=4.6) 31 1.5
SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_42027| Best HMM Match : CorA (HMM E-Value=0.65) 30 2.0
SB_44228| Best HMM Match : LMP (HMM E-Value=0.11) 30 2.0
SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 30 2.6
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 29 3.5
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 3.5
SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085) 29 3.5
SB_19137| Best HMM Match : Pox_A_type_inc (HMM E-Value=3e-05) 29 3.5
SB_45038| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_39075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_5761| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_2892| Best HMM Match : RasGAP_C (HMM E-Value=0.83) 29 4.6
SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098) 29 6.1
SB_58287| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066) 28 8.0
SB_24697| Best HMM Match : Filament (HMM E-Value=0.11) 28 8.0
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 8.0
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 51.6 bits (118), Expect = 8e-07
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +1
Query: 508 SELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLT 687
+E+E++L+ + K N +LQKT KK Q+ ++Q +E QR + A+RR L
Sbjct: 1659 NEMEINLENSMKANQELQKTTKKLQQQVKDLQLMVEEEQRGRDDARESAARAERRSAELA 1718
Query: 688 GEVEEIRGNYEQAYALRLSRAAIRGSQT-RVNELTVINVNLSSSKAK 825
E+E++R EQA R + R R+ E++ NL K K
Sbjct: 1719 AELEDLRNQLEQADRARRTADQERADAVDRLAEVSNQVNNLQQGKRK 1765
Score = 37.9 bits (84), Expect = 0.010
Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +1
Query: 511 ELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTG 690
ELE LD K + + QK KK ++ EIQ DE Q+ L AQ +
Sbjct: 1857 ELERELDNEAKRSAESQKLAKKNERRMKEIQFQADEDQKNL-------ARAQENSDRMNN 1909
Query: 691 EVEEIRGNYEQAYALRLSR-AAIRGSQTRVNELTVINVNLSSSKAK 825
+++++R E+A AL + A R +QT + E L SS K
Sbjct: 1910 KLKKMRTAVEEAEALAAANLARFRKAQTELEEAEERVEQLESSLQK 1955
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Frame = +1
Query: 511 ELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQ----------LQVTLDQYGV 660
+L L ++ LQK K+ + TE++ H E Q + L+ TLD+ +
Sbjct: 968 QLNEELQQQDEAIAKLQKAKKQVEDERTELEDHLQEEQNKVSHLTKTKLKLESTLDEVNL 1027
Query: 661 AQRRIQSLTGEVEEIRGNYE 720
R + + GEVE+++ E
Sbjct: 1028 NLEREKKVRGEVEKVKRKLE 1047
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/76 (21%), Positives = 35/76 (46%)
Frame = +1
Query: 511 ELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTG 690
E++ LD KT L+K + + + ++ + +Q+Q Q + ++
Sbjct: 1238 EMQEELDQVKKTKAKLEKEKAQLTNEGDDLAVTVETLQKQKQASEKNNRAISDQLAESKA 1297
Query: 691 EVEEIRGNYEQAYALR 738
+ EE+R N ++ A+R
Sbjct: 1298 QNEELRKNIQELQAIR 1313
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 511 ELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTG 690
+L+ +L + ++Q+T + + +L +Q YD+ Q +++ Q G A+R I SL G
Sbjct: 1303 DLDENLARTKREKDEIQRTFQGVTGKLNAVQAAYDKAQERIRDLETQLGSAKRSITSLEG 1362
Query: 691 EVEEIRGN 714
+V +R N
Sbjct: 1363 DVISLRSN 1370
Score = 31.9 bits (69), Expect = 0.65
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +1
Query: 481 HQEEVANPDSELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGV 660
H E+ + L+ LD + LQ +K QL E++TH + ++ + +
Sbjct: 2526 HLAELTAEKNTLKTRLDARELDIVRLQSEVKSSVEQLHEVRTHVEVIRTENVSSSKDKNF 2585
Query: 661 AQRRIQSLTGEVEEIR 708
++++ +L EE+R
Sbjct: 2586 IEKKLTNLQTAYEELR 2601
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 511 ELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSL 684
++E L +A + +DL + + + + EIQ + V +L Y AQ RI+ L
Sbjct: 1289 DIEHDLKIAEQRALDLDENLARTKREKDEIQRTFQGVTGKLNAVQAAYDKAQERIRDL 1346
>SB_29745| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.04)
Length = 1481
Score = 35.5 bits (78), Expect = 0.053
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +1
Query: 553 DLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGN------ 714
D K + + +L E+Q Q L+ +D +AQR +++ E E R
Sbjct: 412 DADKHNELLAYRLEEVQGKLSRTQSSLRDIMDSSAIAQRDLKAKMNEFEFERDELSLKLQ 471
Query: 715 -YEQAYALRLSRAAIRGSQTRVNELTVINVNLSS 813
YE A L+ + IR + R+NEL N L S
Sbjct: 472 EYEDAPDLKKANHRIRQQELRINELLAENARLVS 505
>SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/56 (25%), Positives = 33/56 (58%)
Frame = +1
Query: 559 QKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQA 726
Q+TIK++ ++ E + ++Q + + +++ Q + L ++EE++ +YEQA
Sbjct: 190 QETIKEEVVEEIEGDEEFQKLQNKYKQVVEEKNTLQGELDGLQTQLEELQADYEQA 245
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +1
Query: 472 SHTHQEEVANPDSELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQ 651
+ TH +E +L +++ N LQK + + +++ Q ++ +L+ LD+
Sbjct: 80 TETHIKECEREIQKLRNTIEDKNYHINKLQKNLLRTQMEMESEQEKHESELEELRAQLDK 139
Query: 652 YGVAQRRIQSLTGE-VEEIRGNYEQAYALRLSRAAIRGSQTRVNELTVINVNLSSSKAK 825
+ +SL E ++E++ NYE+ R A S R +ELT + K+K
Sbjct: 140 --LENSDTESLVEERMKELKANYEREVEELKERLAKGESDARDSELTERIQEIDDLKSK 196
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 508 SELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRI 675
S+LE L+VAN+ +L+K + + + +L + YD R L + Q R+
Sbjct: 799 SKLESQLNVANQRKFELEKALDEANKELKPLSDKYDRASRDLDILQKTLDDTQSRL 854
>SB_30353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1553
Score = 32.7 bits (71), Expect = 0.37
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Frame = +1
Query: 382 RNRSHPQADKHRNRTAERSRRGSRD*IEV*SHTHQEEVANPDSELELSLDVANKTNIDLQ 561
R R + HRN +R R S+D E EE + ELE L+ ANK +L+
Sbjct: 1267 RYREATSSLTHRNSVIQRMRDESKDISE-----QAEESKHRQLELESKLNAANKRISNLE 1321
Query: 562 KTIKKQSL-------QLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTGEVEE 702
+ ++K+ + QL++I D R L+ L + R+ Q EE
Sbjct: 1322 ERLEKKQMSSLESSEQLSQIIEDKDRAIRDLKSELSELRERDRQSQEKVYHREE 1375
>SB_55959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 32.3 bits (70), Expect = 0.49
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 8 RRIQSLTGEVEEIRGNYEQALRVKAQSSSNTRNLRLANRKTPSPAKTRKW 157
R + +T + IRG E+ L+VK T+ LR+ RKTP ++ W
Sbjct: 9 RTTRKVTVCADLIRGAKEKKLKVKGPVRMPTKFLRITTRKTPCGEGSKTW 58
>SB_2494| Best HMM Match : M (HMM E-Value=0.0056)
Length = 737
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +1
Query: 565 TIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQA 726
TIK++ ++ E + ++Q + + +++ Q + L ++EE++ +YEQA
Sbjct: 1 TIKEEVVEEIEGDEEFQKLQNKYKQVVEEKNTLQGELDGLQTQLEELQADYEQA 54
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 484 QEEVANPDSELELSLDVA-NKTNIDLQKTIKKQSLQLTE-IQTHYDEVQRQLQVTLDQYG 657
++E+ N ELE + A K + D+QK + + ++ + + V+ QL L+
Sbjct: 1744 KQELDNKIKELESEKETALEKMSEDMQKQSRSRVAEMKKKAEAKISSVKNQLTTQLESKV 1803
Query: 658 VAQRRIQSLTGEVEEIRGNYEQAYALRLSRAA 753
R+++ GEVE+ + ++ L+RAA
Sbjct: 1804 NEITRLKANLGEVEKNMEELKSEHSKELARAA 1835
>SB_12493| Best HMM Match : RrnaAD (HMM E-Value=4.6)
Length = 984
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -2
Query: 217 ARGDGGSTR*CSREHHASHHPFSCFRGRGRLSVRESEIPRIAARLSLNA*GLLVVATNLL 38
A+ D STR + EH F + GRG +V +S + I RL L +++ N+
Sbjct: 20 AKDDRYSTRTPAEEHAQLRSVFDAYAGRGACAVVQSSLKTIDIRLVLRQ-WIMISCANIA 78
Query: 37 N 35
N
Sbjct: 79 N 79
>SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +1
Query: 487 EEVANPDSELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQ 666
EE + ++L+ D + +L+ + +L +++ EV+RQ + TLD+ AQ
Sbjct: 67 EEQEDKLADLKDRTDTHEEVRKELEDYEMEGDEKLLDLEAKLKEVERQEKETLDKLHEAQ 126
Query: 667 RRIQSLTGEVEEIRGNYEQAYA 732
RR LT + E + YA
Sbjct: 127 RREVVLTKDYERAVEKGDNFYA 148
>SB_42027| Best HMM Match : CorA (HMM E-Value=0.65)
Length = 369
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 481 HQEEVANPDSELELSLDVANKTNIDLQKTIKKQSLQ--LTEIQTHYDEVQRQL 633
HQE+ N SE E L++ANK N ++ + LQ L++I D+++ +L
Sbjct: 125 HQEDQYNAISEAEKQLNIANKHNNSRTTSLIGKLLQGVLSDISLQADKLEEKL 177
>SB_44228| Best HMM Match : LMP (HMM E-Value=0.11)
Length = 276
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 490 EVANPDSELELSLDVANKTNIDLQKTIKKQSLQL-TEIQTHYDEVQRQLQVTLDQYGVAQ 666
E + L L AN+ + L++ +K+ + ++ Q H DE+QR Q
Sbjct: 162 EARATNESLVSELRNANEDKVTLKEQLKQMEQAIESQRQRHSDEIQRISAEHEHQCAKLS 221
Query: 667 RRIQSLTGEVEE 702
++I+SL+ E EE
Sbjct: 222 QKIESLSSEQEE 233
>SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1401
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Frame = +1
Query: 613 DEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIR----GNYEQAYALRLSR--AAIRGSQTR 774
DE RQLQ ++ G Q R+ L +++E+R G QA ++ + A+R + R
Sbjct: 633 DEKNRQLQNLANRDGAQQARVSGLQDQIDELRRMFSGAQGQAMKEKVEKELEAVRAEEKR 692
Query: 775 VNELTVINVNLSSSK 819
V+ +L+S++
Sbjct: 693 VHAQATAARDLASAQ 707
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 538 NKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNY 717
NK +LQ +K+Q L +Q D++ L+V +++ +AQR + E+ Y
Sbjct: 1409 NKELQELQNNLKQQ---LAVVQQKSDKLSEDLKVKIEEVEIAQREAKRTEEHYNELVTRY 1465
Query: 718 EQ 723
E+
Sbjct: 1466 ER 1467
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +1
Query: 553 DLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTGEVE----EIRGNYE 720
DL+ + + + T + D++Q +LQ D+ QRR + ++E E+ +E
Sbjct: 953 DLEARLDEAIKRRTSAEEDLDDMQTELQTLKDEMAEGQRRYKKQQDKLEALNVELTKEHE 1012
Query: 721 QAYALRLSRAAIRGSQTRVNEL 786
LR +R R + ++NEL
Sbjct: 1013 YVEELRENR---RKLEAKINEL 1031
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.5 bits (63), Expect = 3.5
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +1
Query: 529 DVANKTNIDLQKTIKKQSLQL-TEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEI 705
DVA T IDL+ K+ LQ+ + + H EV + L +DQ R Q L +V I
Sbjct: 63 DVAKDTIIDLETAYKRFQLQIEADRERHQYEVSK-LNQRIDQ---LTRENQRLNEQVFNI 118
Query: 706 RGNYEQAYALRLSRAAIRGSQTRVNELTVINVNLSS 813
R ++ + LS AA R ++ R E+ + LSS
Sbjct: 119 RSECKR-HQEDLS-AANRKTREREREIESLRRELSS 152
>SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085)
Length = 512
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/72 (23%), Positives = 37/72 (51%)
Frame = +1
Query: 484 QEEVANPDSELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVA 663
+E+ N + E++ + + +++ KK + EIQT DE+QR +Q ++
Sbjct: 126 KEQCCNQEMEIQKLRSQLGQVSSSYRESEKKSA----EIQTLNDELQRNIQELTERVATL 181
Query: 664 QRRIQSLTGEVE 699
+ ++L G++E
Sbjct: 182 ETENRTLRGQLE 193
>SB_19137| Best HMM Match : Pox_A_type_inc (HMM E-Value=3e-05)
Length = 462
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/46 (26%), Positives = 28/46 (60%)
Frame = +1
Query: 586 QLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQ 723
+L E++ Y+++++QLQ +Q+R++ EV+++R E+
Sbjct: 310 ELVEMRHAYNKLKKQLQEKTADLDHSQKRVEQHDAEVKKLRARVEE 355
>SB_45038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 40 GDSWQLRAGPTR*GSVEQQYEESQTREQKDALARENKKMGDDL 168
GD+W+ + G + E E +E+K+ + E KKMG +L
Sbjct: 222 GDAWKQKTGKLQ----EIMKERDALKEEKEKVEAEQKKMGSEL 260
>SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 406 DKHRNRTAERSRRGSRD*IEV*SHTHQEEVANPDSELE 519
DK ++ T SRRG + H H EE +PDS+ E
Sbjct: 238 DKPKDTTPPSSRRGVGFAADDSDHAHDEEHRDPDSDAE 275
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 511 ELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQR------QLQVTLDQYGVAQRR 672
+L+LSL ++ LQ I + +++ +EVQR L+ + + G +R
Sbjct: 1576 DLKLSLSISQAEKQQLQTRIDELDRAHADLRETAEEVQRIKKENASLKAQVKELGEIRRS 1635
Query: 673 IQSLTGEVEEIRGNYEQAYALRLSRAAIR 759
+ L GE+ E E+ L+ A+R
Sbjct: 1636 VSELKGELVEAEALKEKFIQLQRVERALR 1664
>SB_39075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 379 RRNRSHPQADKHRNRTAERSRRGSRD 456
R N+ H DKHRNR + R RD
Sbjct: 57 RDNKRHAIRDKHRNRIRDNKRHAIRD 82
>SB_5761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +1
Query: 595 EIQTHYDEVQRQLQVTLDQYGVAQR-----RIQSLTGEVEEIRGNYEQAYAL 735
++ +Y LQ T D+ G A ++QS G+ E+ NY+QA +L
Sbjct: 88 DVMNNYQHALSLLQKTGDESGQANAYLGMGKVQSFQGKYEDAMNNYQQALSL 139
>SB_2892| Best HMM Match : RasGAP_C (HMM E-Value=0.83)
Length = 333
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/45 (31%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 460 IEV*SHTHQEEVANPDSEL-ELSLDVANKTNIDLQKTIKKQSLQL 591
+E HQEE ++++ E++ ++ N+T+I LQK+ + Q ++L
Sbjct: 153 LEATRRLHQEETICYENQINEVNEEIQNETDIGLQKSKRLQEMEL 197
>SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098)
Length = 661
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +1
Query: 598 IQTHYDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNYEQAYALRLSRAAIRGSQTRV 777
++ E+Q Q Q + ++Y + + L G++EE+R N ++ + +L R G+Q
Sbjct: 264 LEEELQEIQVQHQSSNERYAEIVDKEKGLAGQLEELR-NSKKTLSSQLQRRKTLGNQMEA 322
Query: 778 NELT 789
+ T
Sbjct: 323 KQNT 326
>SB_58287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 583 LQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLTGEVEEIRGNY 717
LQL + Q + Q QLQ L Q V Q++ + G +++++ ++
Sbjct: 440 LQLQQQQLELQKQQLQLQQQLQQLEVLQQQQRQTAGSIDQVQADH 484
>SB_35254| Best HMM Match : Vicilin_N (HMM E-Value=0.066)
Length = 909
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 484 QEEVANPDSELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLD 648
+EEV L + + D++KT +K LT+ Q+H + +R T+D
Sbjct: 783 KEEVGRNVERLSTDIKRLSFELEDIEKTQEKSEADLTQFQSHIERERRDEIATID 837
>SB_24697| Best HMM Match : Filament (HMM E-Value=0.11)
Length = 266
Score = 28.3 bits (60), Expect = 8.0
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Frame = +1
Query: 487 EEVANPDSELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYD--EVQRQL-------QV 639
E++ N +SELE + V N N ++ K ++LQL + H D EV+R + ++
Sbjct: 93 EDLKNKNSELEQN--VQNLNNEIIKLEAKLEALQLENNKLHEDSLEVKRTIGDLESDYKM 150
Query: 640 TLDQYGVAQRRIQSLTGEVEEIRGNYEQAYALRLS-RAAIRGSQTRVNEL 786
++D+ A ++ V E+ Q+ R +A + Q ++N L
Sbjct: 151 SMDEKDNAHNEAKNTAKRVFELESKLAQSEQARNDLQAQVHSLQQKLNSL 200
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 370 REGRRNRSHPQADKHRNRTAERSRRGSRD*IEV*SHTHQEEVANPDSELE 519
REG + R + +HR+R ++ R RD H ++V D E+E
Sbjct: 190 REGEKPRDRDRDRRHRDRDRDKERDKDRD-----YHRDNDKVRQEDEEME 234
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/73 (17%), Positives = 34/73 (46%)
Frame = +1
Query: 508 SELELSLDVANKTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQSLT 687
SELE + D A+K DL++ + Q+ ++ +++ + + + + + +L
Sbjct: 627 SELESAFDAADKEKRDLEQQVLSQTPKIKRLESELQDALNRASALEEDAKNHNQVVDNLQ 686
Query: 688 GEVEEIRGNYEQA 726
E+ ++ +A
Sbjct: 687 DEITRLKNKLSEA 699
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,129,767
Number of Sequences: 59808
Number of extensions: 368687
Number of successful extensions: 1490
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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