Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0404
         (827 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    32   0.025
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    26   1.2  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   5.0  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   8.7  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   8.7  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 31.9 bits (69), Expect = 0.025
 Identities = 11/32 (34%), Positives = 23/32 (71%)
 Frame = +1

Query: 541 KTNIDLQKTIKKQSLQLTEIQTHYDEVQRQLQ 636
           K   D+QK+ +++  QL  ++ HY+++QR+L+
Sbjct: 887 KNRNDVQKSFREKQDQLARMREHYEQIQRELK 918


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 175 HHASHHPFSCFRGRGRLSVRESEIPRIAARLSLNA 71
           HH + H  +CF  RG L +   E  ++   L L+A
Sbjct: 354 HHLARHAVACFLTRGDLWISWEEGMKVFEELLLDA 388


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = +1

Query: 358  ASSAREGRRNRSHP--QADK--HRNRTAERSRRGSR 453
            A S + G R+RS    QA +   R+R+  RSR GSR
Sbjct: 1139 AGSRKSGSRSRSRSGSQASRGSRRSRSRSRSRSGSR 1174


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 686 VSDCILRWATPYWSRVTCN 630
           V D ILR+A P W   T N
Sbjct: 803 VVDSILRYAAPVWHEATKN 821


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/40 (22%), Positives = 23/40 (57%)
 Frame = +1

Query: 559 QKTIKKQSLQLTEIQTHYDEVQRQLQVTLDQYGVAQRRIQ 678
           ++T +++ L+   +Q H DE++ Q Q   ++  + +R  +
Sbjct: 398 EQTEQQRQLRAARMQAHLDEIEWQRQREAEEAVLTRREYE 437


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = -2

Query: 721 ARSCHESPQPLR*VTVSC--AGRLRTGRESP---ATASGPHRSGS 602
           +R CH SP     V + C  +G L    E+    A+ +GPHR GS
Sbjct: 416 SRDCH-SPVNHSNVCIRCGTSGHLAATCEAEVRCASCAGPHRMGS 459


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,055
Number of Sequences: 2352
Number of extensions: 12214
Number of successful extensions: 67
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)