Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0394
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    28   0.062
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   5.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.2  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 27.9 bits (59), Expect = 0.062
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 268 INKNIKLDLSFYNIINWVIYE*ERSKFRLHYRKVYSMIT 152
           INK I+ D+   N+   + YE +R++ R+H    Y  +T
Sbjct: 106 INKLIEFDVKLQNVSLIINYENQRTRSRIHLFVRYVFVT 144


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/43 (23%), Positives = 22/43 (51%)
 Frame = -3

Query: 213 FTSKNVVSLGYITEKCIQ*LLKFSVDWRPELDRSSRRGQFCMD 85
           FTS  +  +  + ++C+  L +F  D   E+D  +   ++ +D
Sbjct: 134 FTSGKMKLMFPLMQECVDDLRRFLEDHTEEIDVKTAMKKYSVD 176


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 407 VKQNV*DLKTWDIQSY 360
           +KQ+V DLK W  + Y
Sbjct: 301 IKQDVEDLKRWSDRIY 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,807
Number of Sequences: 336
Number of extensions: 2012
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)