Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0388
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   0.98 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   0.98 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.3  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   4.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   6.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.1  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 416 VYVLRKVLVFFCF*LLISFVVY 351
           V+ L  +L+FF F L I  +VY
Sbjct: 236 VFFLGSILIFFIFPLAILIIVY 257


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 545 PDLEVQYPAFKKVLQSVLTQPKVKAFLDLGG 637
           P+L+V    F+       T PKVK  + +GG
Sbjct: 73  PELDVDQNGFRNFTNLKKTHPKVKLQVAVGG 103


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 569 AFKKVLQSVLTQPKVKAFLDLGGHTNLNFNI 661
           A +K+    +T P ++  LDLG H N +  I
Sbjct: 54  ANEKIPLKDITPPDLEGILDLGRHENFSLFI 84


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 157 PDFKPKTPFGQMPVLVIDGK 216
           P+ KP+TPF    +L ++ K
Sbjct: 114 PNRKPRTPFTTQQLLALEKK 133


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 545 PDLEVQYPAFKKVLQSVLTQPKVKAFLDLGG 637
           P+L+V     KK     L  P +K  + +GG
Sbjct: 70  PNLDVNQGNLKKFNALKLKNPNLKTLVAIGG 100


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 572 FKKVLQSVLTQPKVKAFLDLGGHTNLN 652
           ++KV       PK+K  L +GG+ +++
Sbjct: 86  YRKVTDLKKRFPKLKVLLSVGGNADVS 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,736
Number of Sequences: 336
Number of extensions: 2810
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)