Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0388
(670 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19919| Best HMM Match : GST_N (HMM E-Value=4.7e-22) 60 2e-09
SB_37695| Best HMM Match : GST_N (HMM E-Value=2.4e-24) 55 5e-08
SB_11982| Best HMM Match : GST_N (HMM E-Value=7.9e-15) 52 6e-07
SB_28555| Best HMM Match : GST_N (HMM E-Value=3.5e-18) 50 2e-06
SB_54755| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07) 33 0.28
SB_38768| Best HMM Match : HAMP (HMM E-Value=4.5e-14) 31 0.85
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_8005| Best HMM Match : Glutaredoxin (HMM E-Value=0.00023) 30 1.5
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 30 1.5
SB_42689| Best HMM Match : Spectrin (HMM E-Value=0) 30 2.0
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_5046| Best HMM Match : GST_N (HMM E-Value=2.5e-05) 30 2.0
SB_34976| Best HMM Match : N_methyl (HMM E-Value=1.7) 29 2.6
SB_25424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_36082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_19919| Best HMM Match : GST_N (HMM E-Value=4.7e-22)
Length = 79
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +1
Query: 40 MPKVVYHYFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFKPK--TPFGQMPVLVIDG 213
MP +YF + E R++ A G +FED+R+ +WP K + PFGQ+P+LVID
Sbjct: 1 MPSYKLYYFNARGRAEPARLVFAAAGIEFEDNRMAMGEWPKVKKELHAPFGQVPLLVIDD 60
Query: 214 K-QYAQSTAICRYL 252
K + AQS AI ++
Sbjct: 61 KIKLAQSLAIMTFI 74
>SB_37695| Best HMM Match : GST_N (HMM E-Value=2.4e-24)
Length = 102
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +1
Query: 37 KMPKVVYHYFACKALGESGRMLLAYGGQDFEDHRVLS-ADWPDFKPK--TPFGQMPVLVI 207
KMP HYF + E R+ A G ++ED R +W KP+ PFGQ+P+LVI
Sbjct: 22 KMPSYKLHYFNARGRAEPARLAFAAAGIEYEDKRFEGREEWLRVKPELDPPFGQVPLLVI 81
Query: 208 DGK-QYAQSTAICRYL 252
D K + AQS AI Y+
Sbjct: 82 DDKIKLAQSMAILAYV 97
>SB_11982| Best HMM Match : GST_N (HMM E-Value=7.9e-15)
Length = 221
Score = 51.6 bits (118), Expect = 6e-07
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +1
Query: 40 MPKVVYHYFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFKP--KTPFGQMPVLVIDG 213
MP YF + E R+ A GG +ED R+ +W K KT G +PVL +DG
Sbjct: 1 MPNYKLIYFNTRGRAEPTRLCFAAGGIPYEDVRLTGEEWTKMKAENKTIMGYLPVLEVDG 60
Query: 214 KQYAQSTAICRYLGASTG 267
QY +S AI R G
Sbjct: 61 IQYCESMAIFRLAAKLAG 78
>SB_28555| Best HMM Match : GST_N (HMM E-Value=3.5e-18)
Length = 195
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 61 YFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFKP--KTPFGQMPVLVI-DGKQYAQS 231
YF +A E R+LL F D RV DW K + PFG++P+L I DG++ AQS
Sbjct: 9 YFDARARAECIRVLLHLADVPFTDERVAPPDWAAMKTSGRCPFGELPLLEISDGRKLAQS 68
Query: 232 TAICRYL 252
AI R+L
Sbjct: 69 HAIFRFL 75
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +3
Query: 369 EELKAKKHEDFSKNVYPDMLKKLNSIVEANKG---HIAAGKLTWGDFVF 506
E +K +K ++F + P L+ +N + + NKG ++ K+T+ D F
Sbjct: 93 EHVKEQKSKEFHEETLPKRLEFINKLFQENKGGKGYLVGDKITYADIDF 141
>SB_54755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +3
Query: 249 PRRKYGLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDML 428
P K LA ++D D V+ D+ + + +E DE + + F + P +
Sbjct: 127 PAVKSSLAPSDDYLQARCDMLVDNNKDMMDRLGEIVWELDEVRQEMLKKKFYDEILPVQM 186
Query: 429 KKLNSIVEAN---KGHIAAGKLTWGDFVF 506
+ +N +++ N KG++ K+T+ D F
Sbjct: 187 ENINKLLQENNGGKGYLVGDKITYADIDF 215
>SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07)
Length = 1146
Score = 32.7 bits (71), Expect = 0.28
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -3
Query: 479 SGSNVTFVRFNYRVQLLQHIR-VYVLRKVLVFFCF*LLISFVVYSGRFGANIVQELHVLV 303
SGS FV +R + + V VL +FC L FV+ RF +Q+ + +
Sbjct: 811 SGSLYKFVLLLFRFPVQVRVTSVQVLCTDFCYFCSGSLYRFVLLLFRFSVQKLQDAYTQL 870
Query: 302 DLEGLLVIGPGE 267
L+ VI PGE
Sbjct: 871 ALQAAKVISPGE 882
>SB_38768| Best HMM Match : HAMP (HMM E-Value=4.5e-14)
Length = 235
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = -3
Query: 518 QTCCEHEITPCQLSGSNVTFVRFNYRVQLLQHIRVYVLRKVLVFFCF*LLISFVVYSGRF 339
+ CCE ++ G +R + LQ + KV +FF LL+SF+V S
Sbjct: 89 ENCCECKVKGVPFEGEYHYILRIQVSLNTLQEEINSLRNKVTLFFIAMLLLSFIV-SKFL 147
Query: 338 GANIVQELH 312
+V LH
Sbjct: 148 AQKLVSRLH 156
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/76 (18%), Positives = 38/76 (50%)
Frame = +3
Query: 171 KDSVRSDASISDRRQAVRSEHRHLQVPRRKYGLAGANDEEAFEIDQNVEFLHDIRAKAAA 350
K+ + A++ + ++A+ + + + R+K +EE + + ++ L + R + A
Sbjct: 1154 KEEAKRKAAVEESQKAIEAARKKQEEIRQKQAAWRQQEEEEQRVKERLQILREERERIEA 1213
Query: 351 VYYEADEELKAKKHED 398
+ EAD ++ +K +
Sbjct: 1214 LNKEADLLIQRRKEAE 1229
>SB_8005| Best HMM Match : Glutaredoxin (HMM E-Value=0.00023)
Length = 271
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 43 PKV-VYHYFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFKPKTPFGQMPVLVIDGKQ 219
PK+ +Y Y C + R L Y G D+ V + + T + ++P+ ++DGKQ
Sbjct: 94 PKITLYQYQTCPFCCKV-RAYLEYFGIDYTKVEVNPLTRKEIEFSTEYRKVPIAIVDGKQ 152
Query: 220 YAQSTA 237
ST+
Sbjct: 153 PGGSTS 158
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/75 (30%), Positives = 40/75 (53%)
Frame = +3
Query: 165 QAKDSVRSDASISDRRQAVRSEHRHLQVPRRKYGLAGANDEEAFEIDQNVEFLHDIRAKA 344
QA+ S S+A IS++++ V SE V R + +DE+ +Q ++ L++ +
Sbjct: 128 QAEPSTASEA-ISNKQRKVLSESDRSNVHRETPSCS--HDEKIKAAEQKIKILNNNLEEK 184
Query: 345 AAVYYEADEELKAKK 389
VY + EELK K+
Sbjct: 185 EKVYEKVLEELKRKE 199
>SB_42689| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1317
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Frame = +3
Query: 360 EADEELKAKKHEDFSKNVYPDMLKKLNSIVE-----ANKGHIAAGKLT 488
EA +EL KKHE+FSK + +K+N +++ AN GH A K+T
Sbjct: 267 EAVQEL-IKKHEEFSKRM-DVQDEKINQMIQFAQRLANDGHYAQDKIT 312
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Frame = +3
Query: 165 QAKDSV-RSDASIS---DRRQAVRSEHRHLQVPRRKYGLA-GANDEEAFEIDQNVEFLHD 329
Q K+ + RSDA ++ + RQA+ +E RHL+ ++ A + +I + + D
Sbjct: 2024 QLKEQIKRSDAKLAKEMESRQAMETEIRHLEKDKKDLQQAVNQQQVDLSDIQRALTEEQD 2083
Query: 330 IRAKAAAVYYEADEELKAKKHE-DFSKNVYPDMLKKLNSIVEANKGHIA 473
+RA+ +Y + ++ E S ++ +L ++ + K H A
Sbjct: 2084 LRARMTEMYNDQKKQTSVLMEEAKNSSQQQAVVMAELEAVDQTRKSHEA 2132
>SB_5046| Best HMM Match : GST_N (HMM E-Value=2.5e-05)
Length = 280
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 70 CKALGESGRMLLAYGGQDFEDHR 138
C+ LG+ R+LL Y +DFED R
Sbjct: 194 CQKLGQPIRLLLKYTNEDFEDKR 216
>SB_34976| Best HMM Match : N_methyl (HMM E-Value=1.7)
Length = 177
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 47 RLCTITSLARLSGRAAVCCSPTEAR-TSKTTACSPLTGLTSSQRLRSVR 190
R+C +GR C SPT A T++T A S LT +S+ ++R
Sbjct: 67 RICEYKKDCSQAGRVPRCISPTTATLTTETIAASQLTPSSSATTTTTIR 115
>SB_25424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 46 KVVYHYFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFKPK 174
+V HYF + E R+++ G + + DWP K K
Sbjct: 53 QVTLHYFGSRGKAEGIRLMMEDNGVLYAETNYTKEDWPTVKQK 95
>SB_36082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 321 LHDIRAKAAAVYYEA--DEELKAKKHEDFSKNVYP 419
LHD+R +AAAV A EE E+F+K+ +P
Sbjct: 15 LHDVRDRAAAVLERAKTGEERADDSEEEFAKSFHP 49
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 47 RLCTITSLARLSGRAAVCCSP-TEARTSKTTACSPLTGLTSS 169
R+C +GR C SP TE T++T A S LT +S+
Sbjct: 110 RICEYKKDCSQAGRVPRCISPTTETLTTETIAASQLTPSSSA 151
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 47 RLCTITSLARLSGRAAVCCSP-TEARTSKTTACSPLTGLTSS 169
R+C +GR C SP TE T++T A S LT +S+
Sbjct: 311 RICEYKKDCSQAGRVPRCISPTTETLTTETIAASQLTPSSSA 352
>SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 62 TSLARLSGRAAVCCSPTEARTSKTTACSPLTGLTSSQRLRSVR 190
+SL + RA CSP +AC PL G+ SQ L V+
Sbjct: 981 SSLTSFTDRA---CSPMAVEEESQSACVPLVGVPLSQALVKVQ 1020
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +3
Query: 258 KYGLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKL 437
K L AN + + ++ VE D AK + + ++ ++ +KH + + L+KL
Sbjct: 608 KNQLKQANQKLGHDRERAVEDAKDAFAKIKDLEKQLEDAIEKRKHAEQESDELEADLQKL 667
Query: 438 NSIVEANKGHIA 473
+ + K HIA
Sbjct: 668 KDELASTKRHIA 679
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,173,631
Number of Sequences: 59808
Number of extensions: 369076
Number of successful extensions: 1103
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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