Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0378
(329 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45856| Best HMM Match : DUF755 (HMM E-Value=4.7) 39 9e-04
SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5) 39 9e-04
SB_41016| Best HMM Match : RPEL (HMM E-Value=8.9) 36 0.006
SB_39882| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.006
SB_28599| Best HMM Match : MSSP (HMM E-Value=6.8) 36 0.006
SB_10424| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.006
SB_52707| Best HMM Match : RPEL (HMM E-Value=8.9) 36 0.006
SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5) 36 0.006
SB_30254| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.006
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.006
SB_25877| Best HMM Match : TP1 (HMM E-Value=8.5) 33 0.043
SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.056
SB_46955| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.056
SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8) 33 0.056
SB_45983| Best HMM Match : HLH (HMM E-Value=1.3) 32 0.13
SB_45914| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.23
SB_8046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.92
SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1) 28 2.1
SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33) 28 2.1
SB_4602| Best HMM Match : dsrm (HMM E-Value=5.9e-14) 28 2.1
SB_45246| Best HMM Match : zf-MYND (HMM E-Value=0.19) 27 2.8
SB_5107| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.8
SB_33357| Best HMM Match : Neur_chan_memb (HMM E-Value=8.3e-10) 27 3.7
SB_32671| Best HMM Match : SerH (HMM E-Value=0.4) 27 3.7
SB_30875| Best HMM Match : Rubredoxin (HMM E-Value=1.6) 27 4.9
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 27 4.9
SB_14134| Best HMM Match : Hormone_3 (HMM E-Value=2.3) 27 4.9
SB_53052| Best HMM Match : U79_P34 (HMM E-Value=2.7) 26 6.5
SB_13615| Best HMM Match : YscO (HMM E-Value=0.65) 26 6.5
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 26 8.5
SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038) 26 8.5
SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_30648| Best HMM Match : PsbI (HMM E-Value=6.2) 26 8.5
>SB_45856| Best HMM Match : DUF755 (HMM E-Value=4.7)
Length = 187
Score = 39.1 bits (87), Expect = 9e-04
Identities = 19/29 (65%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Frame = -2
Query: 328 IFSLRWSLPPA*GCTLKQPDS----KERP 254
IFS RWSLPP GC KQPDS +ERP
Sbjct: 106 IFSFRWSLPPILGCIPKQPDSSKAHRERP 134
>SB_12256| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 156
Score = 39.1 bits (87), Expect = 9e-04
Identities = 19/29 (65%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Frame = -2
Query: 328 IFSLRWSLPPA*GCTLKQPDS----KERP 254
IFS RWSLPP GC KQPDS +ERP
Sbjct: 75 IFSFRWSLPPILGCIPKQPDSSKAHRERP 103
>SB_41016| Best HMM Match : RPEL (HMM E-Value=8.9)
Length = 148
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 267 ESGCLRVQP*AGGKLHLRLNM 329
ESGCL +QP GGKLHL+LN+
Sbjct: 59 ESGCLGMQPKMGGKLHLKLNI 79
>SB_39882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 267 ESGCLRVQP*AGGKLHLRLNM 329
ESGCL +QP GGKLHL+LN+
Sbjct: 5 ESGCLGMQPKMGGKLHLKLNI 25
>SB_28599| Best HMM Match : MSSP (HMM E-Value=6.8)
Length = 148
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 267 ESGCLRVQP*AGGKLHLRLNM 329
ESGCL +QP GGKLHL+LN+
Sbjct: 59 ESGCLGMQPKMGGKLHLKLNI 79
>SB_10424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 267 ESGCLRVQP*AGGKLHLRLNM 329
ESGCL +QP GGKLHL+LN+
Sbjct: 33 ESGCLGMQPKMGGKLHLKLNI 53
>SB_52707| Best HMM Match : RPEL (HMM E-Value=8.9)
Length = 147
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 267 ESGCLRVQP*AGGKLHLRLNM 329
ESGCL +QP GGKLHL+LN+
Sbjct: 58 ESGCLGMQPKMGGKLHLKLNI 78
>SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5)
Length = 206
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 267 ESGCLRVQP*AGGKLHLRLNM 329
ESGCL +QP GGKLHL+LN+
Sbjct: 117 ESGCLGMQPKMGGKLHLKLNI 137
>SB_30254| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 267 ESGCLRVQP*AGGKLHLRLNM 329
ESGCL +QP GGKLHL+LN+
Sbjct: 16 ESGCLGMQPKMGGKLHLKLNI 36
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 267 ESGCLRVQP*AGGKLHLRLNM 329
ESGCL +QP GGKLHL+LN+
Sbjct: 722 ESGCLGMQPKMGGKLHLKLNI 742
>SB_25877| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 139
Score = 33.5 bits (73), Expect = 0.043
Identities = 16/25 (64%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Frame = -2
Query: 316 RWSLPPA*GCTLKQPDS----KERP 254
RWSLPP GC KQPDS +ERP
Sbjct: 62 RWSLPPILGCIPKQPDSSKAHRERP 86
>SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 33.1 bits (72), Expect = 0.056
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 321 ALDGVYHPLRAALSSNPTLR 262
ALDGVYHP AA +NPT R
Sbjct: 58 ALDGVYHPFWAAFPNNPTRR 77
>SB_46955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 33.1 bits (72), Expect = 0.056
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -2
Query: 316 RWSLPPA*GCTLKQPDSKE 260
RWSLPP GC KQPDS +
Sbjct: 35 RWSLPPILGCIPKQPDSSK 53
>SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8)
Length = 411
Score = 33.1 bits (72), Expect = 0.056
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 321 ALDGVYHPLRAALSSNPTLR 262
ALDGVYHP AA +NPT R
Sbjct: 344 ALDGVYHPFWAAFPNNPTRR 363
>SB_45983| Best HMM Match : HLH (HMM E-Value=1.3)
Length = 68
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 318 LDGVYHPLRAALSSNPTLRS-VLSPRPSVATGLAP 217
LDGVYHP AA +NPT R +++ R G P
Sbjct: 2 LDGVYHPFWAAFPNNPTRRKHIVNDRGRRRRGFHP 36
>SB_45914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -3
Query: 321 ALDGVYHPLRAALSSNPTLR 262
ALDG YHP AA +NPT R
Sbjct: 58 ALDGFYHPFWAAFPNNPTRR 77
>SB_8046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 100 ALNPVVLIDNGRCGVREVPLSRRDDSCPSAS 192
+LNPV NG C R + R DSCP S
Sbjct: 904 SLNPVCNKLNGNCTCRSNAIGRLCDSCPDGS 934
>SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1)
Length = 1139
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 267 LRSVLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPV 127
L S P P T + + + T +G++++RKR P TT+P+
Sbjct: 172 LSSRKRPAPITTTPITTTITNHRLNCHTNSGILSSRKRPAPITTTPI 218
>SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33)
Length = 997
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 94 SPALNPVVLIDNGRCGVREVPLS-RRDDSCP 183
S LN +DNGRCG +P S R+D CP
Sbjct: 543 SMQLNHGRFLDNGRCGYVLMPESIRQDGFCP 573
>SB_4602| Best HMM Match : dsrm (HMM E-Value=5.9e-14)
Length = 579
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 288 ALSSNPTLRSVLSPRPSVATGLAPSTGKRPRSR 190
ALS P ++ SP P+V GL+P P+ R
Sbjct: 444 ALSQEPGTFAMYSPIPAVLPGLSPDGAPHPQHR 476
>SB_45246| Best HMM Match : zf-MYND (HMM E-Value=0.19)
Length = 1828
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -2
Query: 193 KTHLDRSRRDEKAEPPEHHISRYRLKQRDSV-LGYIPVRSPLLRKSWLVSFPP 38
KT S + P +RYR++ RDSV ++ R+P S L++F P
Sbjct: 364 KTANATSSATNTTDLPRRRGTRYRIRARDSVDKSFVKFRNPNPSFSGLLTFEP 416
>SB_5107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 314 MEFTTRLGLHSQAT 273
MEFTT GLHSQ T
Sbjct: 1 MEFTTHFGLHSQTT 14
>SB_33357| Best HMM Match : Neur_chan_memb (HMM E-Value=8.3e-10)
Length = 306
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +1
Query: 88 EYSPALNPVVLIDNGRCGVREVPLSRRDDSCPSAS*TGPFSRRGCQARSDGGSRRED 258
EY L V DNG +V +S+ +SC G R C A S+G R+ D
Sbjct: 215 EYVAVLMVVDYHDNGHHDNGDVNVSQNGNSCGQPKEDGKCPRSKCGADSNGLLRKCD 271
>SB_32671| Best HMM Match : SerH (HMM E-Value=0.4)
Length = 406
Score = 27.1 bits (57), Expect = 3.7
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -3
Query: 288 ALSSNPTLR-SVLSPRPSVATGLA--PSTGKRPRSRRTWTGVVATRKRNLPNTTS 133
+L S P+L S +P AT L PST S T T + AT +LP+T+S
Sbjct: 171 SLPSTPSLEASSNTPTALSATSLMSLPSTSSLEASSNTPTALSATSLMSLPSTSS 225
>SB_30875| Best HMM Match : Rubredoxin (HMM E-Value=1.6)
Length = 1130
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 187 HLDRSRRDEKAEPPEHHISRYR 122
H+D++ R A PP HH ++R
Sbjct: 731 HVDQAERPRVATPPTHHKDQHR 752
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 303 HPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKR 202
HP+ A+ + T S+ S ++ TG+AP+ GKR
Sbjct: 829 HPVSASTAQQDTA-SLFSQPAALPTGVAPTHGKR 861
>SB_14134| Best HMM Match : Hormone_3 (HMM E-Value=2.3)
Length = 683
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -1
Query: 299 RLGLH--SQATRL*GASSRRDPPSLRAWHPLRENG 201
RLG+H S AT + SSRR PP + H +R+ G
Sbjct: 432 RLGVHKHSVATHVEADSSRRRPPGVHRCH-IRKGG 465
>SB_53052| Best HMM Match : U79_P34 (HMM E-Value=2.7)
Length = 1130
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -1
Query: 299 RLGLH--SQATRL*GASSRRDPPSLRAWHPLRENG 201
RLG+H S AT + SRR PPS+ H +R+ G
Sbjct: 713 RLGVHKHSVATHVEADPSRRRPPSVHRCH-IRKGG 746
>SB_13615| Best HMM Match : YscO (HMM E-Value=0.65)
Length = 348
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 146 GRFRFLVATTPVQVRLERGRFPVEGARPVATEGRGERTLLRV 271
G+ RF+ A V +RL RGR ++ R A + RT++R+
Sbjct: 125 GKERFVKAVRTV-IRLNRGRQRIQNIRGKARFIKAVRTVIRI 165
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -3
Query: 279 SNPTLRSVLSPRPSVATGLAP-STGKRPRSRRTWTGVVATRKRNLPNTTSP 130
S PT + +P + P +T + RT T V T + P TT+P
Sbjct: 156 SPPTTTTTTTPETTAPRTTTPETTTPETTTPRTTTPVTTTPRTTTPETTTP 206
>SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038)
Length = 1172
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = -2
Query: 160 KAEPPEHHISRYRLKQRDSVLGYIPVRSPLLRKSWLVSFPPLTNMLK 20
K P +H+++ + +++L Y R + + W++ L N+ K
Sbjct: 1002 KTPQPPYHVTKEQQDFENALLQYTRERGLVAHQPWIIKINQLRNLSK 1048
>SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 282 SSNPTLRSVLSPRPSVATGLAPSTGKRPRSRRT 184
S+NPT +S SP P +T P + P +R+
Sbjct: 526 STNPTPQSSTSPTPQSSTIHTPQSSTSPTPQRS 558
>SB_30648| Best HMM Match : PsbI (HMM E-Value=6.2)
Length = 372
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 177 GVVATRKRNLPNTTSPVID*NNGIQCWAIFLFARRY*GNPG 55
G + K NLP+T VI + GI W++ RR N G
Sbjct: 98 GDIIIDKHNLPDTGENVIARHWGIDQWSMGYLCRRGQSNGG 138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,616,028
Number of Sequences: 59808
Number of extensions: 225380
Number of successful extensions: 711
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 463065397
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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