BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0378
(329 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ252125-1|CAB64387.1| 470|Drosophila melanogaster Sox14 protei... 28 2.5
AE013599-3763|AAF47126.2| 669|Drosophila melanogaster CG3090-PB... 28 2.5
AE013599-3762|AAM68286.1| 669|Drosophila melanogaster CG3090-PA... 28 2.5
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 28 3.3
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 28 3.3
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 28 3.3
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 28 3.3
AY069587-1|AAL39732.2| 639|Drosophila melanogaster LD33388p pro... 27 4.3
AY061420-1|AAL28968.1| 1107|Drosophila melanogaster LD35137p pro... 27 4.3
AY060445-1|AAL25484.1| 1107|Drosophila melanogaster LD48089p pro... 27 4.3
AY058785-1|AAL14014.1| 1068|Drosophila melanogaster SD08329p pro... 27 4.3
AF022364-1|AAC47804.1| 1096|Drosophila melanogaster B4 protein. 27 4.3
AE014296-109|AAN11444.1| 1340|Drosophila melanogaster CG17090-PB... 27 4.3
AE014296-108|AAF47392.2| 1340|Drosophila melanogaster CG17090-PA... 27 4.3
AE014134-2363|AAF53312.1| 1107|Drosophila melanogaster CG9239-PB... 27 4.3
AE014134-2362|AAF53317.2| 1107|Drosophila melanogaster CG9239-PA... 27 4.3
BT021348-1|AAX33496.1| 867|Drosophila melanogaster LP19379p pro... 27 5.7
AY128429-1|AAM75022.1| 953|Drosophila melanogaster GH26723p pro... 27 5.7
AE014134-3116|AAF53814.1| 1309|Drosophila melanogaster CG10188-P... 27 5.7
AE014134-3115|AAN11046.2| 1309|Drosophila melanogaster CG10188-P... 27 5.7
AE013599-1894|AAF58246.1| 867|Drosophila melanogaster CG17386-P... 27 5.7
U31368-1|AAA92297.1| 2527|Drosophila melanogaster transcription ... 27 7.5
L42311-1|AAA98814.1| 2529|Drosophila melanogaster zinc finger pr... 27 7.5
AE014297-4302|AAF56842.1| 411|Drosophila melanogaster CG11833-P... 27 7.5
AE013599-1219|AAF58712.1| 2532|Drosophila melanogaster CG7734-PC... 27 7.5
AE013599-1218|AAF58713.1| 2532|Drosophila melanogaster CG7734-PB... 27 7.5
AE013599-1217|AAM68718.1| 2532|Drosophila melanogaster CG7734-PA... 27 7.5
AE013599-1216|AAS64914.1| 2577|Drosophila melanogaster CG7734-PD... 27 7.5
AY069816-1|AAL39961.1| 1169|Drosophila melanogaster SD05642p pro... 26 10.0
AE014298-1532|AAF47982.1| 378|Drosophila melanogaster CG16922-P... 26 10.0
AE014298-611|AAF45929.2| 483|Drosophila melanogaster CG32774-PA... 26 10.0
AE014296-1450|AAF50423.3| 1169|Drosophila melanogaster CG7161-PA... 26 10.0
>AJ252125-1|CAB64387.1| 470|Drosophila melanogaster Sox14 protein
protein.
Length = 470
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -3
Query: 303 HPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPV 127
HP A S+ TL SP PS A+ +P+ + P +++T + T + + ++PV
Sbjct: 41 HPAPKADSTPHTLPP-FSPSPSPASSPSPAPAQTPGAQKTQSQAAITHPAAVASPSAPV 98
>AE013599-3763|AAF47126.2| 669|Drosophila melanogaster CG3090-PB,
isoform B protein.
Length = 669
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -3
Query: 303 HPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPV 127
HP A S+ TL SP PS A+ +P+ + P +++T + T + + ++PV
Sbjct: 41 HPAPKADSTPHTLPP-FSPSPSPASSPSPAPAQTPGAQKTQSQAAITHPAAVASPSAPV 98
>AE013599-3762|AAM68286.1| 669|Drosophila melanogaster CG3090-PA,
isoform A protein.
Length = 669
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -3
Query: 303 HPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPV 127
HP A S+ TL SP PS A+ +P+ + P +++T + T + + ++PV
Sbjct: 41 HPAPKADSTPHTLPP-FSPSPSPASSPSPAPAQTPGAQKTQSQAAITHPAAVASPSAPV 98
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p
protein.
Length = 2176
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 282 SSNPTLRSVLSPRPSVATGLAPSTGK-RPRSRRTWTGVVATRKRNLPNTTSPVI 124
S +PT+ +P P+ A G+ RP++R + + TR L SPVI
Sbjct: 309 SISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNSSSPATTTRATRLSKAGSPVI 362
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 282 SSNPTLRSVLSPRPSVATGLAPSTGK-RPRSRRTWTGVVATRKRNLPNTTSPVI 124
S +PT+ +P P+ A G+ RP++R + + TR L SPVI
Sbjct: 433 SISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNSSSPATTTRATRLSKAGSPVI 486
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 282 SSNPTLRSVLSPRPSVATGLAPSTGK-RPRSRRTWTGVVATRKRNLPNTTSPVI 124
S +PT+ +P P+ A G+ RP++R + + TR L SPVI
Sbjct: 486 SISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNSSSPATTTRATRLSKAGSPVI 539
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 282 SSNPTLRSVLSPRPSVATGLAPSTGK-RPRSRRTWTGVVATRKRNLPNTTSPVI 124
S +PT+ +P P+ A G+ RP++R + + TR L SPVI
Sbjct: 433 SISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNSSSPATTTRATRLSKAGSPVI 486
>AY069587-1|AAL39732.2| 639|Drosophila melanogaster LD33388p
protein.
Length = 639
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 193 KTHLDRSRRDEKAEPPEHHISR 128
K HL+ R D K E P HHI++
Sbjct: 28 KHHLNLPRNDLKKESPAHHIAK 49
>AY061420-1|AAL28968.1| 1107|Drosophila melanogaster LD35137p
protein.
Length = 1107
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 321 ALDGVYHPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRP 199
+L V L A+ SSN TL+S S S A + STG P
Sbjct: 233 SLPRVVRILHASKSSNETLQSSSSHGSSTAASSSSSTGANP 273
>AY060445-1|AAL25484.1| 1107|Drosophila melanogaster LD48089p
protein.
Length = 1107
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 321 ALDGVYHPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRP 199
+L V L A+ SSN TL+S S S A + STG P
Sbjct: 233 SLPRVVRILHASKSSNETLQSSSSHGSSTAASSSSSTGANP 273
>AY058785-1|AAL14014.1| 1068|Drosophila melanogaster SD08329p
protein.
Length = 1068
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 193 KTHLDRSRRDEKAEPPEHHISR 128
K HL+ R D K E P HHI++
Sbjct: 458 KHHLNLPRNDLKKESPAHHIAK 479
>AF022364-1|AAC47804.1| 1096|Drosophila melanogaster B4 protein.
Length = 1096
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 321 ALDGVYHPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRP 199
+L V L A+ SSN TL+S S S A + STG P
Sbjct: 222 SLPRVVRILHASKSSNETLQSSSSHGSSTAASSSSSTGANP 262
>AE014296-109|AAN11444.1| 1340|Drosophila melanogaster CG17090-PB,
isoform B protein.
Length = 1340
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 193 KTHLDRSRRDEKAEPPEHHISR 128
K HL+ R D K E P HHI++
Sbjct: 729 KHHLNLPRNDLKKESPAHHIAK 750
>AE014296-108|AAF47392.2| 1340|Drosophila melanogaster CG17090-PA,
isoform A protein.
Length = 1340
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 193 KTHLDRSRRDEKAEPPEHHISR 128
K HL+ R D K E P HHI++
Sbjct: 729 KHHLNLPRNDLKKESPAHHIAK 750
>AE014134-2363|AAF53312.1| 1107|Drosophila melanogaster CG9239-PB,
isoform B protein.
Length = 1107
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 321 ALDGVYHPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRP 199
+L V L A+ SSN TL+S S S A + STG P
Sbjct: 233 SLPRVVRILHASKSSNETLQSSSSHGSSTAASSSSSTGANP 273
>AE014134-2362|AAF53317.2| 1107|Drosophila melanogaster CG9239-PA,
isoform A protein.
Length = 1107
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 321 ALDGVYHPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRP 199
+L V L A+ SSN TL+S S S A + STG P
Sbjct: 233 SLPRVVRILHASKSSNETLQSSSSHGSSTAASSSSSTGANP 273
>BT021348-1|AAX33496.1| 867|Drosophila melanogaster LP19379p
protein.
Length = 867
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 79 SEQEYSPALNPVVLIDNGRCGVREVPLSRRDDSCPSAS*TGPFSRR 216
SEQ Y+P +NP + C RRD +C + P SRR
Sbjct: 612 SEQNYTPEVNPSMSRRASNCSETGGVPQRRDSNCSESC---PCSRR 654
>AY128429-1|AAM75022.1| 953|Drosophila melanogaster GH26723p
protein.
Length = 953
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 6 DHPPNLSILVSGGKETNQDFLSSGERTGI*PSTESRCFNR*REMWCSGGSA 158
+HPP ++L ET+ SG TG + F+R +E W SG S+
Sbjct: 743 NHPPPAALL-DDSHETDNGLSGSG--TGSSTPSVGGTFDRRKEKWLSGSSS 790
>AE014134-3116|AAF53814.1| 1309|Drosophila melanogaster CG10188-PB,
isoform B protein.
Length = 1309
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 6 DHPPNLSILVSGGKETNQDFLSSGERTGI*PSTESRCFNR*REMWCSGGSA 158
+HPP ++L ET+ SG TG + F+R +E W SG S+
Sbjct: 1099 NHPPPAALL-DDSHETDNGLSGSG--TGSSTPSVGGTFDRRKEKWLSGSSS 1146
>AE014134-3115|AAN11046.2| 1309|Drosophila melanogaster CG10188-PA,
isoform A protein.
Length = 1309
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 6 DHPPNLSILVSGGKETNQDFLSSGERTGI*PSTESRCFNR*REMWCSGGSA 158
+HPP ++L ET+ SG TG + F+R +E W SG S+
Sbjct: 1099 NHPPPAALL-DDSHETDNGLSGSG--TGSSTPSVGGTFDRRKEKWLSGSSS 1146
>AE013599-1894|AAF58246.1| 867|Drosophila melanogaster CG17386-PA
protein.
Length = 867
Score = 27.1 bits (57), Expect = 5.7
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 79 SEQEYSPALNPVVLIDNGRCGVREVPLSRRDDSCPSAS*TGPFSRR 216
SEQ Y+P +NP + C RRD +C + P SRR
Sbjct: 612 SEQNYTPEVNPSMSRRASNCSETGGVPQRRDSNCSESC---PCSRR 654
>U31368-1|AAA92297.1| 2527|Drosophila melanogaster transcription
factor protein.
Length = 2527
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 318 LDGVYHPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRPR 196
L P R + + PT+ + +P P+VAT APS+ P+
Sbjct: 1141 LSAAQTPARTSTVTAPTV-TASAPAPAVATVTAPSSAPAPQ 1180
>L42311-1|AAA98814.1| 2529|Drosophila melanogaster zinc finger protein
protein.
Length = 2529
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 318 LDGVYHPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRPR 196
L P R + + PT+ + +P P+VAT APS+ P+
Sbjct: 1145 LSAAQTPARTSTVTAPTV-TASAPAPAVATVTAPSSAPAPQ 1184
>AE014297-4302|AAF56842.1| 411|Drosophila melanogaster CG11833-PA
protein.
Length = 411
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 315 DGVYHPLRAALSS-NPTLRSVLSPRPSVATGLA 220
+G++ PL A S NP L +VL+P P + + LA
Sbjct: 277 EGIWVPLSVASDSQNPNLFAVLAPYPRLRSFLA 309
>AE013599-1219|AAF58712.1| 2532|Drosophila melanogaster CG7734-PC,
isoform C protein.
Length = 2532
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 318 LDGVYHPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRPR 196
L P R + + PT+ + +P P+VAT APS+ P+
Sbjct: 1146 LSAAQTPARTSTVTAPTV-TASAPAPAVATVTAPSSAPAPQ 1185
>AE013599-1218|AAF58713.1| 2532|Drosophila melanogaster CG7734-PB,
isoform B protein.
Length = 2532
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 318 LDGVYHPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRPR 196
L P R + + PT+ + +P P+VAT APS+ P+
Sbjct: 1146 LSAAQTPARTSTVTAPTV-TASAPAPAVATVTAPSSAPAPQ 1185
>AE013599-1217|AAM68718.1| 2532|Drosophila melanogaster CG7734-PA,
isoform A protein.
Length = 2532
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 318 LDGVYHPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRPR 196
L P R + + PT+ + +P P+VAT APS+ P+
Sbjct: 1146 LSAAQTPARTSTVTAPTV-TASAPAPAVATVTAPSSAPAPQ 1185
>AE013599-1216|AAS64914.1| 2577|Drosophila melanogaster CG7734-PD,
isoform D protein.
Length = 2577
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 318 LDGVYHPLRAALSSNPTLRSVLSPRPSVATGLAPSTGKRPR 196
L P R + + PT+ + +P P+VAT APS+ P+
Sbjct: 1191 LSAAQTPARTSTVTAPTV-TASAPAPAVATVTAPSSAPAPQ 1230
>AY069816-1|AAL39961.1| 1169|Drosophila melanogaster SD05642p
protein.
Length = 1169
Score = 26.2 bits (55), Expect = 10.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 193 KTHLDRSRRDEKAEPPEHHISRYR 122
K HLD E+ P +HH++ Y+
Sbjct: 876 KQHLDVYHAKEEQNPVDHHLTEYK 899
>AE014298-1532|AAF47982.1| 378|Drosophila melanogaster CG16922-PA
protein.
Length = 378
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 285 LSSNPTLRSVLSPRPSVATGLAPSTGKRPRS 193
+ S+PT S SP P+ AP+ G P S
Sbjct: 257 MESHPTSSSSCSPAPASVPASAPAPGPAPAS 287
>AE014298-611|AAF45929.2| 483|Drosophila melanogaster CG32774-PA
protein.
Length = 483
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 261 SVLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTS 133
S S +P+ T P+T P T T + T LP TTS
Sbjct: 267 STTSTQPTTTTTPLPTTTTTPLPTTTTTPLPTTTTTPLPTTTS 309
>AE014296-1450|AAF50423.3| 1169|Drosophila melanogaster CG7161-PA
protein.
Length = 1169
Score = 26.2 bits (55), Expect = 10.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 193 KTHLDRSRRDEKAEPPEHHISRYR 122
K HLD E+ P +HH++ Y+
Sbjct: 876 KQHLDVYHAKEEQNPVDHHLTEYK 899
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,811,655
Number of Sequences: 53049
Number of extensions: 327552
Number of successful extensions: 965
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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