Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0378
         (329 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      25   0.31 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   2.2  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   2.9  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   2.9  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   3.9  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   3.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    20   8.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   8.9  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 0.31
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 137 HLPLSIKTTGFSAGLYSCSLAATKE 63
           H PLS+K  G   GL    LA T +
Sbjct: 319 HTPLSVKFPGMGHGLQPPDLAGTSQ 343


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 286 TLKQPDSKERPLAATLRRYGPGTLYGKTA 200
           T+KQPD+ E     TL +   G  +G+ A
Sbjct: 268 TIKQPDTPEEKYIRTLSK---GDFFGEKA 293


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 131 PLSIKTTGFSAGLYSCSLAATKE 63
           P    TTGFS   Y C  +  KE
Sbjct: 79  PSVASTTGFSKECYCCRESYLKE 101


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 131 PLSIKTTGFSAGLYSCSLAATKE 63
           P    TTGFS   Y C  +  KE
Sbjct: 79  PSVASTTGFSKECYCCRESYLKE 101


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 212 VEGARPVATEGRGERTLLRVGLLES 286
           VE    VAT G+GE   L V  ++S
Sbjct: 173 VEIPHDVATTGKGELVSLTVQAMDS 197


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 151 PPEHHISRYRLKQRD 107
           PP+  IS YR  +RD
Sbjct: 127 PPQEVISHYRRTRRD 141


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 169 RDEKAEPPEHHISRYRLKQRD 107
           +D +   PE+  S YRL + D
Sbjct: 93  KDNRLRLPENMTSEYRLLEVD 113


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 273 PTLRSVLSPRPSVATG 226
           PTL   L+P P   TG
Sbjct: 215 PTLACPLNPNPQPLTG 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,078
Number of Sequences: 438
Number of extensions: 1790
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)