Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0364
         (393 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome ass...    29   2.2  
BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p pro...    29   2.2  
AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA...    29   2.2  

>U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome
           assembly protein NAP-1 protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +2

Query: 131 GKGYTLRTHFSS*QYFSNGTLNIQIHEKQAV 223
           G  YTL  HF   +YFSN  L  Q   K  V
Sbjct: 185 GHSYTLEFHFDKNEYFSNSVLTKQYVLKSTV 215


>BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p
           protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +2

Query: 131 GKGYTLRTHFSS*QYFSNGTLNIQIHEKQAV 223
           G  YTL  HF   +YFSN  L  Q   K  V
Sbjct: 185 GHSYTLEFHFDKNEYFSNSVLTKQYVLKSTV 215


>AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA
           protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +2

Query: 131 GKGYTLRTHFSS*QYFSNGTLNIQIHEKQAV 223
           G  YTL  HF   +YFSN  L  Q   K  V
Sbjct: 185 GHSYTLEFHFDKNEYFSNSVLTKQYVLKSTV 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,071,849
Number of Sequences: 53049
Number of extensions: 291989
Number of successful extensions: 527
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)