Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0362
         (427 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    26   0.18 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.31 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   1.6  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.8 bits (54), Expect = 0.18
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 76  AINIHEHAGRGIRQPSPAPHLRRLPA 153
           A+ + + AG G R P PA   R LPA
Sbjct: 318 AVQVPQLAGGGRRGPGPARSRRHLPA 343


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 247 KYGSFSDANYCLIFSLLHDVYVEGRDGDLVQRL 149
           KYG F+DA  C       D Y E  DG + ++L
Sbjct: 42  KYGFFADAEQC-------DKYYECNDGQITEKL 67


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
          protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 83 LIACVGSSIDGTHSFPVCSHRLK 15
          L ACVGS+I G     +C   LK
Sbjct: 5  LTACVGSAIAGFLFLLICDSYLK 27


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 283 YFKLNKFSLKCWKYGSFSDANYCLIFSLLHDV 188
           +  + K +++ +  G F D    LIFSL+ +V
Sbjct: 724 FISIAKHNVRTFSAGGFFDIRKNLIFSLIANV 755


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +1

Query: 94  HAGRGIRQPSPAPHLRRLPAAGQG-PR 171
           H G G+  P P  + +  PA G+  PR
Sbjct: 10  HTGGGLMPPQPYMNAQDAPAGGENEPR 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,142
Number of Sequences: 336
Number of extensions: 1836
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)