Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0362
(427 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032627-1|AAH32627.1| 295|Homo sapiens glycine N-methyltransfe... 57 2e-08
AL158815-2|CAI19462.1| 295|Homo sapiens glycine N-methyltransfe... 57 2e-08
AF101477-1|AAF78290.1| 295|Homo sapiens glycine N-methyltransfe... 57 2e-08
AF101475-1|AAF78289.1| 295|Homo sapiens glycine N-methyltransfe... 57 2e-08
X62250-1|CAA44164.1| 263|Homo sapiens liver glycine methyltrans... 49 8e-06
AK075356-1|BAC11566.1| 216|Homo sapiens protein ( Homo sapiens ... 33 0.40
AK027150-1|BAB15673.1| 155|Homo sapiens proteinase inhibitor. ... 29 5.0
U77914-1|AAC50909.1| 263|Homo sapiens soluble protein Jagged pr... 29 8.7
U77720-1|AAC51323.1| 1214|Homo sapiens transmembrane protein Jag... 29 8.7
U73936-1|AAC52020.1| 1218|Homo sapiens Jagged 1 protein. 29 8.7
U61276-1|AAB39007.1| 1218|Homo sapiens transmembrane protein Jag... 29 8.7
BC126207-1|AAI26208.1| 1218|Homo sapiens jagged 1 (Alagille synd... 29 8.7
BC126205-1|AAI26206.1| 1218|Homo sapiens jagged 1 (Alagille synd... 29 8.7
BC098393-1|AAH98393.1| 1218|Homo sapiens jagged 1 (Alagille synd... 29 8.7
AL035456-3|CAC07198.1| 1218|Homo sapiens jagged 1 (Alagille synd... 29 8.7
AF028593-1|AAB84053.1| 1218|Homo sapiens transmembrane protein J... 29 8.7
AF003837-1|AAC51731.1| 1218|Homo sapiens Jagged1 protein. 29 8.7
>BC032627-1|AAH32627.1| 295|Homo sapiens glycine
N-methyltransferase protein.
Length = 295
Score = 57.2 bits (132), Expect = 2e-08
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 44 SEFRLCYYPHKLSTFTSMLDEAFDNRARHHIYGDFQPL--DKVPVPAFYIHVMQ 199
S+FRL YYPH L++FT +L AF + +H + GDF+P + +P ++IHV++
Sbjct: 239 SKFRLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLK 292
>AL158815-2|CAI19462.1| 295|Homo sapiens glycine
N-methyltransferase protein.
Length = 295
Score = 57.2 bits (132), Expect = 2e-08
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 44 SEFRLCYYPHKLSTFTSMLDEAFDNRARHHIYGDFQPL--DKVPVPAFYIHVMQ 199
S+FRL YYPH L++FT +L AF + +H + GDF+P + +P ++IHV++
Sbjct: 239 SKFRLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLK 292
>AF101477-1|AAF78290.1| 295|Homo sapiens glycine
N-methyltransferase protein.
Length = 295
Score = 57.2 bits (132), Expect = 2e-08
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 44 SEFRLCYYPHKLSTFTSMLDEAFDNRARHHIYGDFQPL--DKVPVPAFYIHVMQ 199
S+FRL YYPH L++FT +L AF + +H + GDF+P + +P ++IHV++
Sbjct: 239 SKFRLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLK 292
>AF101475-1|AAF78289.1| 295|Homo sapiens glycine
N-methyltransferase protein.
Length = 295
Score = 57.2 bits (132), Expect = 2e-08
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +2
Query: 44 SEFRLCYYPHKLSTFTSMLDEAFDNRARHHIYGDFQPL--DKVPVPAFYIHVMQ 199
S+FRL YYPH L++FT +L AF + +H + GDF+P + +P ++IHV++
Sbjct: 239 SKFRLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLK 292
>X62250-1|CAA44164.1| 263|Homo sapiens liver glycine
methyltransferase protein.
Length = 263
Score = 48.8 bits (111), Expect = 8e-06
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +2
Query: 44 SEFRLCYYPHKLSTFTSMLDEAFDNRARHHIYGDFQPL--DKVPVPAFYIHVMQ 199
S+FRL YYPH L++FT +F + +H + GDF+P + +P ++IHV++
Sbjct: 208 SKFRLSYYPHCLASFTES-PSSFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLK 260
>AK075356-1|BAC11566.1| 216|Homo sapiens protein ( Homo sapiens
cDNA PSEC0040 fis, clone NT2RP1000905. ).
Length = 216
Score = 33.1 bits (72), Expect = 0.40
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +1
Query: 67 PTQAINIHEHAGRGIRQPSPAPHLRRLPAAGQGPRPCLL 183
P + A RG R+P PAPHL GPRPCLL
Sbjct: 156 PASTCSAGRPAARGRRRPLPAPHL--------GPRPCLL 186
>AK027150-1|BAB15673.1| 155|Homo sapiens proteinase inhibitor.
protein.
Length = 155
Score = 29.5 bits (63), Expect = 5.0
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 203 SSA*RVCRRQG-RGPCPAAGSLRRCGAGLGCRMPR 102
S++ R CRR+G PCP G + L C PR
Sbjct: 12 SASSRQCRRRGLAAPCPGCGPGAQSAMSLACAPPR 46
>U77914-1|AAC50909.1| 263|Homo sapiens soluble protein Jagged
protein.
Length = 263
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 163 GPRPCLLHTRHAE 201
GPRPCLLH H+E
Sbjct: 156 GPRPCLLHKGHSE 168
>U77720-1|AAC51323.1| 1214|Homo sapiens transmembrane protein Jagged
protein.
Length = 1214
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 163 GPRPCLLHTRHAE 201
GPRPCLLH H+E
Sbjct: 885 GPRPCLLHKGHSE 897
>U73936-1|AAC52020.1| 1218|Homo sapiens Jagged 1 protein.
Length = 1218
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 163 GPRPCLLHTRHAE 201
GPRPCLLH H+E
Sbjct: 898 GPRPCLLHKGHSE 910
>U61276-1|AAB39007.1| 1218|Homo sapiens transmembrane protein Jagged
1 protein.
Length = 1218
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 163 GPRPCLLHTRHAE 201
GPRPCLLH H+E
Sbjct: 898 GPRPCLLHKGHSE 910
>BC126207-1|AAI26208.1| 1218|Homo sapiens jagged 1 (Alagille
syndrome) protein.
Length = 1218
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 163 GPRPCLLHTRHAE 201
GPRPCLLH H+E
Sbjct: 898 GPRPCLLHKGHSE 910
>BC126205-1|AAI26206.1| 1218|Homo sapiens jagged 1 (Alagille
syndrome) protein.
Length = 1218
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 163 GPRPCLLHTRHAE 201
GPRPCLLH H+E
Sbjct: 898 GPRPCLLHKGHSE 910
>BC098393-1|AAH98393.1| 1218|Homo sapiens jagged 1 (Alagille
syndrome) protein.
Length = 1218
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 163 GPRPCLLHTRHAE 201
GPRPCLLH H+E
Sbjct: 898 GPRPCLLHKGHSE 910
>AL035456-3|CAC07198.1| 1218|Homo sapiens jagged 1 (Alagille
syndrome) protein.
Length = 1218
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 163 GPRPCLLHTRHAE 201
GPRPCLLH H+E
Sbjct: 898 GPRPCLLHKGHSE 910
>AF028593-1|AAB84053.1| 1218|Homo sapiens transmembrane protein
Jagged 1 protein.
Length = 1218
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 163 GPRPCLLHTRHAE 201
GPRPCLLH H+E
Sbjct: 898 GPRPCLLHKGHSE 910
>AF003837-1|AAC51731.1| 1218|Homo sapiens Jagged1 protein.
Length = 1218
Score = 28.7 bits (61), Expect = 8.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 163 GPRPCLLHTRHAE 201
GPRPCLLH H+E
Sbjct: 898 GPRPCLLHKGHSE 910
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,182,028
Number of Sequences: 237096
Number of extensions: 1084037
Number of successful extensions: 2927
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2926
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -