Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0362
(427 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003464-1|AAO39467.1| 289|Drosophila melanogaster RH06404p pro... 66 1e-11
AE014297-1566|AAF54848.1| 289|Drosophila melanogaster CG6188-PA... 66 1e-11
AY071730-1|AAL49352.1| 702|Drosophila melanogaster RH44902p pro... 28 4.5
AE014134-1888|AAF52952.2| 702|Drosophila melanogaster CG5337-PA... 28 4.5
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 27 7.9
BT029936-1|ABM92810.1| 647|Drosophila melanogaster IP15810p pro... 27 7.9
AY122172-1|AAM52684.1| 730|Drosophila melanogaster LD29479p pro... 27 7.9
AE014135-37|AAN06517.1| 730|Drosophila melanogaster CG2316-PG, ... 27 7.9
AE014135-36|AAN06516.1| 730|Drosophila melanogaster CG2316-PE, ... 27 7.9
AE014135-35|AAN06515.1| 730|Drosophila melanogaster CG2316-PD, ... 27 7.9
AE014135-34|AAF59367.2| 730|Drosophila melanogaster CG2316-PC, ... 27 7.9
AE014135-33|AAF59365.1| 730|Drosophila melanogaster CG2316-PB, ... 27 7.9
AE014135-32|AAF59366.1| 730|Drosophila melanogaster CG2316-PA, ... 27 7.9
AE014134-515|AAN10401.2| 642|Drosophila melanogaster CG3151-PD,... 27 7.9
AE014134-514|AAF51179.3| 647|Drosophila melanogaster CG3151-PA,... 27 7.9
>BT003464-1|AAO39467.1| 289|Drosophila melanogaster RH06404p
protein.
Length = 289
Score = 66.5 bits (155), Expect = 1e-11
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 44 SEFRLCYYPHKLSTFTSMLDEAFDNRARHHIYGDFQPLDKVPVPAFYIHVMQ 199
SEFRL YYPH L F +L E F +A+H +YGDF+ + +V PAFYIH+++
Sbjct: 234 SEFRLSYYPHGLKRFQEILAEIFSAKAKHQLYGDFKEMSQVKNPAFYIHLIE 285
>AE014297-1566|AAF54848.1| 289|Drosophila melanogaster CG6188-PA
protein.
Length = 289
Score = 66.5 bits (155), Expect = 1e-11
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 44 SEFRLCYYPHKLSTFTSMLDEAFDNRARHHIYGDFQPLDKVPVPAFYIHVMQ 199
SEFRL YYPH L F +L E F +A+H +YGDF+ + +V PAFYIH+++
Sbjct: 234 SEFRLSYYPHGLKRFQEILAEIFSAKAKHQLYGDFKEMSQVKNPAFYIHLIE 285
>AY071730-1|AAL49352.1| 702|Drosophila melanogaster RH44902p
protein.
Length = 702
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 164 PCPAAGSLRRCGAGLGCRMPRPACS*MLIACVGSSID 54
PC +G +RCG G+ RPA + CVG S D
Sbjct: 663 PCTLSGLCKRCGPGMWDSEHRPA-----LECVGHSDD 694
>AE014134-1888|AAF52952.2| 702|Drosophila melanogaster CG5337-PA
protein.
Length = 702
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 164 PCPAAGSLRRCGAGLGCRMPRPACS*MLIACVGSSID 54
PC +G +RCG G+ RPA + CVG S D
Sbjct: 663 PCTLSGLCKRCGPGMWDSEHRPA-----LECVGHSDD 694
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 106 GIRQPSPAPHLRRLPAAGQGPRPC 177
G R PSP+ + + LP+A PR C
Sbjct: 36 GDRAPSPSTNSKLLPSANDRPRSC 59
>BT029936-1|ABM92810.1| 647|Drosophila melanogaster IP15810p
protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 82 NIHEHAGRGIRQPSPAPHLRRLPAAGQGPRPCL 180
NI E G I+QPS A + R P G P+P L
Sbjct: 92 NIEEKHGNKIKQPSLAWNNNRKPNKGDLPQPPL 124
>AY122172-1|AAM52684.1| 730|Drosophila melanogaster LD29479p
protein.
Length = 730
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = -1
Query: 376 QRKKKVNQNYFQSVLNQKNLKLTLI*TDPRIYFKLNKFSLKCWKYGSFSDANYCLIFSLL 197
Q KKK N + LN++ LK ++ K+ C++ G S +CLI
Sbjct: 91 QLKKKATNNLVEPGLNKEFLKHL------QMLAKIMIPQAFCYETGLLSVHTFCLISRTF 144
Query: 196 HDVYVEGRDGDLVQ 155
+YV +G LV+
Sbjct: 145 LSIYVAALEGALVK 158
>AE014135-37|AAN06517.1| 730|Drosophila melanogaster CG2316-PG,
isoform G protein.
Length = 730
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = -1
Query: 376 QRKKKVNQNYFQSVLNQKNLKLTLI*TDPRIYFKLNKFSLKCWKYGSFSDANYCLIFSLL 197
Q KKK N + LN++ LK ++ K+ C++ G S +CLI
Sbjct: 91 QLKKKATNNLVEPGLNKEFLKHL------QMLAKIMIPQAFCYETGLLSVHTFCLISRTF 144
Query: 196 HDVYVEGRDGDLVQ 155
+YV +G LV+
Sbjct: 145 LSIYVAALEGALVK 158
>AE014135-36|AAN06516.1| 730|Drosophila melanogaster CG2316-PE,
isoform E protein.
Length = 730
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = -1
Query: 376 QRKKKVNQNYFQSVLNQKNLKLTLI*TDPRIYFKLNKFSLKCWKYGSFSDANYCLIFSLL 197
Q KKK N + LN++ LK ++ K+ C++ G S +CLI
Sbjct: 91 QLKKKATNNLVEPGLNKEFLKHL------QMLAKIMIPQAFCYETGLLSVHTFCLISRTF 144
Query: 196 HDVYVEGRDGDLVQ 155
+YV +G LV+
Sbjct: 145 LSIYVAALEGALVK 158
>AE014135-35|AAN06515.1| 730|Drosophila melanogaster CG2316-PD,
isoform D protein.
Length = 730
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = -1
Query: 376 QRKKKVNQNYFQSVLNQKNLKLTLI*TDPRIYFKLNKFSLKCWKYGSFSDANYCLIFSLL 197
Q KKK N + LN++ LK ++ K+ C++ G S +CLI
Sbjct: 91 QLKKKATNNLVEPGLNKEFLKHL------QMLAKIMIPQAFCYETGLLSVHTFCLISRTF 144
Query: 196 HDVYVEGRDGDLVQ 155
+YV +G LV+
Sbjct: 145 LSIYVAALEGALVK 158
>AE014135-34|AAF59367.2| 730|Drosophila melanogaster CG2316-PC,
isoform C protein.
Length = 730
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = -1
Query: 376 QRKKKVNQNYFQSVLNQKNLKLTLI*TDPRIYFKLNKFSLKCWKYGSFSDANYCLIFSLL 197
Q KKK N + LN++ LK ++ K+ C++ G S +CLI
Sbjct: 91 QLKKKATNNLVEPGLNKEFLKHL------QMLAKIMIPQAFCYETGLLSVHTFCLISRTF 144
Query: 196 HDVYVEGRDGDLVQ 155
+YV +G LV+
Sbjct: 145 LSIYVAALEGALVK 158
>AE014135-33|AAF59365.1| 730|Drosophila melanogaster CG2316-PB,
isoform B protein.
Length = 730
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = -1
Query: 376 QRKKKVNQNYFQSVLNQKNLKLTLI*TDPRIYFKLNKFSLKCWKYGSFSDANYCLIFSLL 197
Q KKK N + LN++ LK ++ K+ C++ G S +CLI
Sbjct: 91 QLKKKATNNLVEPGLNKEFLKHL------QMLAKIMIPQAFCYETGLLSVHTFCLISRTF 144
Query: 196 HDVYVEGRDGDLVQ 155
+YV +G LV+
Sbjct: 145 LSIYVAALEGALVK 158
>AE014135-32|AAF59366.1| 730|Drosophila melanogaster CG2316-PA,
isoform A protein.
Length = 730
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = -1
Query: 376 QRKKKVNQNYFQSVLNQKNLKLTLI*TDPRIYFKLNKFSLKCWKYGSFSDANYCLIFSLL 197
Q KKK N + LN++ LK ++ K+ C++ G S +CLI
Sbjct: 91 QLKKKATNNLVEPGLNKEFLKHL------QMLAKIMIPQAFCYETGLLSVHTFCLISRTF 144
Query: 196 HDVYVEGRDGDLVQ 155
+YV +G LV+
Sbjct: 145 LSIYVAALEGALVK 158
>AE014134-515|AAN10401.2| 642|Drosophila melanogaster CG3151-PD,
isoform D protein.
Length = 642
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 82 NIHEHAGRGIRQPSPAPHLRRLPAAGQGPRPCL 180
NI E G I+QPS A + R P G P+P L
Sbjct: 92 NIEEKHGNKIKQPSLAWNNNRKPNKGDLPQPPL 124
>AE014134-514|AAF51179.3| 647|Drosophila melanogaster CG3151-PA,
isoform A protein.
Length = 647
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 82 NIHEHAGRGIRQPSPAPHLRRLPAAGQGPRPCL 180
NI E G I+QPS A + R P G P+P L
Sbjct: 92 NIEEKHGNKIKQPSLAWNNNRKPNKGDLPQPPL 124
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,561,528
Number of Sequences: 53049
Number of extensions: 356591
Number of successful extensions: 781
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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