Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0362
         (427 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical pr...    33   0.065
Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical pr...    33   0.065
Z72506-7|CAA96620.2|  293|Caenorhabditis elegans Hypothetical pr...    30   0.80 
AC006774-8|AAY43992.1|  295|Caenorhabditis elegans Hypothetical ...    28   3.2  
Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical pr...    27   4.3  
AF068713-16|AAD34663.1|  156|Caenorhabditis elegans Ground-like ...    27   4.3  
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr...    27   7.4  

>Z98877-6|CAD56617.1|  432|Caenorhabditis elegans Hypothetical
           protein Y69H2.3d protein.
          Length = 432

 Score = 33.5 bits (73), Expect = 0.065
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -3

Query: 182 RRQGRGPCPAAGSLRRCGAGLGCRMPRPACS*MLIACVGSSID-GTHSFPVCSH 24
           RRQ    C  A    RCG   GC M RP+       C+GS+++ G    P+C H
Sbjct: 282 RRQAGPSCMTA----RCGTPAGCAMVRPS------GCIGSTVEKGCELMPMCIH 325


>Z98877-3|CAB54472.2|  537|Caenorhabditis elegans Hypothetical
           protein Y69H2.3a protein.
          Length = 537

 Score = 33.5 bits (73), Expect = 0.065
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -3

Query: 182 RRQGRGPCPAAGSLRRCGAGLGCRMPRPACS*MLIACVGSSID-GTHSFPVCSH 24
           RRQ    C  A    RCG   GC M RP+       C+GS+++ G    P+C H
Sbjct: 387 RRQAGPSCMTA----RCGTPAGCAMVRPS------GCIGSTVEKGCELMPMCIH 430


>Z72506-7|CAA96620.2|  293|Caenorhabditis elegans Hypothetical
           protein F07A5.6 protein.
          Length = 293

 Score = 29.9 bits (64), Expect = 0.80
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +1

Query: 112 RQPSPAPHLRRLPAAGQGPRP 174
           R PS APHL R P+  Q PRP
Sbjct: 52  RCPSAAPHLERRPSGRQLPRP 72


>AC006774-8|AAY43992.1|  295|Caenorhabditis elegans Hypothetical
           protein Y46H3A.7 protein.
          Length = 295

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 98  LDEAFDNRARHHIYGDFQPLDKVPV 172
           L   F +  RH +YGD + +DKV V
Sbjct: 34  LSSEFFDHIRHQVYGDLKKVDKVVV 58


>Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical
           protein T02D1.3 protein.
          Length = 322

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 331 LRLIGNNFDLLFSFAVILTWH*IVNK 408
           LR  GNNFD++FS  +  + H +  K
Sbjct: 282 LRPFGNNFDIVFSTMIFYSTHPVFKK 307


>AF068713-16|AAD34663.1|  156|Caenorhabditis elegans Ground-like
           (grd related) protein31 protein.
          Length = 156

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -3

Query: 173 GRGPCPAAGSLRRCGAGLGCRMPRPAC 93
           G G C   G    CG G GC  P P C
Sbjct: 29  GGGGCGGCGG--GCGGGCGCAPPPPPC 53


>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
           protein K09C8.5 protein.
          Length = 1328

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 368 EKSKSKLFPISLKSKEFKIDVDLNRS*NLL*AKQIFLK 255
           E+SKS +F +SLK  E  + +D     N    +Q+ L+
Sbjct: 428 EESKSHIFSVSLKESEQPVIIDAPMDTNATIGQQVTLR 465


>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
           protein K09C8.5 protein.
          Length = 1328

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 368 EKSKSKLFPISLKSKEFKIDVDLNRS*NLL*AKQIFLK 255
           E+SKS +F +SLK  E  + +D     N    +Q+ L+
Sbjct: 428 EESKSHIFSVSLKESEQPVIIDAPMDTNATIGQQVTLR 465


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,170,116
Number of Sequences: 27780
Number of extensions: 179922
Number of successful extensions: 486
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)