Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0358
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     24   1.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.1  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    24   1.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.6  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 281 LSYGYHHHIHTRQMYNVHQLNTKYIY 358
           L YGYH+H    Q YN + L+  Y Y
Sbjct: 60  LQYGYHNH----QNYNSNVLSNGYGY 81


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 281 LSYGYHHHIHTRQMYNVHQLNTKYIY 358
           L YGYH+H    Q YN + L+  Y Y
Sbjct: 60  LQYGYHNH----QNYNSNVLSNGYGY 81


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 281 LSYGYHHHIHTRQMYNVHQLNTKYIY 358
           L YGYH+H    Q YN + L+  Y Y
Sbjct: 60  LQYGYHNH----QNYNSNVLSNGYGY 81


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 281 LSYGYHHHIHTRQMYNVHQLNTKYIY 358
           L YGYH+H    Q YN + L+  Y Y
Sbjct: 60  LQYGYHNH----QNYNSNVLSNGYGY 81


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -1

Query: 136 MLVKIINC*YSITRL--IKTGYIITLIL*PTFSYFITLLLRFD 14
           +L KI +   +++ L  I T +I TL+    FS F+T LL FD
Sbjct: 715 LLFKITSVMIAVSGLVYIATVWICTLMNRCKFSEFMTKLLEFD 757


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -2

Query: 480 MILFVICNLTIYKLLYVGLLFSSPDLYNEHRCD 382
           +++ V+ +   Y   +  +LFS  D + +  CD
Sbjct: 56  LVVSVLMDFIAYFFNFWTILFSRSDFFQQFECD 88


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 373 CQYL*VNILCIQLVYIVHLSCMYMMVIPI 287
           C Y       I  V+++ L C+Y  V+P+
Sbjct: 112 CVYYFYYAFIIFTVHLLFLLCIYYFVVPL 140


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/53 (22%), Positives = 22/53 (41%)
 Frame = -2

Query: 462 CNLTIYKLLYVGLLFSSPDLYNEHRCDQIDVNIFK*IYFVFNWCTLYICLVCI 304
           C +  Y ++ + +L         H C    +  F  I+F F  C  +I L+ +
Sbjct: 38  CRILKYFIIAIYVLTILTSSVTLHVCFNSYMYAFTHIFFFFAICCDFIALIVV 90


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = +1

Query: 136 FNDHAAFLCQPFHIKSIQFQYI*NDYKIKRNANTSCVPHLFSY 264
           F+  + FLC PF+       YI   Y  K +     +  +  Y
Sbjct: 73  FSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGY 115


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = +1

Query: 136 FNDHAAFLCQPFHIKSIQFQYI*NDYKIKRNANTSCVPHLFSY 264
           F+  + FLC PF+       YI   Y  K +     +  +  Y
Sbjct: 29  FSFMSRFLCLPFYSYFFYLSYIYTTYSRKLSGIFKYIDQMAGY 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,571
Number of Sequences: 336
Number of extensions: 3727
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)