Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0358
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68289-1|CAI41998.1|  696|Homo sapiens melanoma associated antig...    32   2.4  
AK090835-1|BAC03529.1|  450|Homo sapiens protein ( Homo sapiens ...    32   2.4  
AK056478-1|BAB71194.1|  637|Homo sapiens protein ( Homo sapiens ...    32   2.4  

>Z68289-1|CAI41998.1|  696|Homo sapiens melanoma associated antigen
           (mutated) 1-like 1 protein.
          Length = 696

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = -2

Query: 615 EITKYIXH*SVFPIIMGVIIWPELSIYPLYKFVLMLNVVNKQS*LMILFVICNLTIYK 442
           E+ ++I H    P   G+I+W +   YP +  V+  ++  K+    +LFV  N+   K
Sbjct: 377 ELPRFILHYETHPFETGMIVWFKYQKYPFWPAVIK-SIRRKERKASVLFVEANMNSEK 433


>AK090835-1|BAC03529.1|  450|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33516 fis, clone BRAMY2005684, moderately
           similar to UBE-1c2. ).
          Length = 450

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = -2

Query: 615 EITKYIXH*SVFPIIMGVIIWPELSIYPLYKFVLMLNVVNKQS*LMILFVICNLTIYK 442
           E+ ++I H    P   G+I+W +   YP +  V+  ++  K+    +LFV  N+   K
Sbjct: 131 ELPRFILHYETHPFETGMIVWFKYQKYPFWPAVIK-SIRRKERKASVLFVEANMNSEK 187


>AK056478-1|BAB71194.1|  637|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31916 fis, clone NT2RP7004915, moderately
           similar to Mus musculus mRNA for UBE-1c2. ).
          Length = 637

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = -2

Query: 615 EITKYIXH*SVFPIIMGVIIWPELSIYPLYKFVLMLNVVNKQS*LMILFVICNLTIYK 442
           E+ ++I H    P   G+I+W +   YP +  V+  ++  K+    +LFV  N+   K
Sbjct: 377 ELPRFILHYETHPFETGMIVWFKYQKYPFWPAVIK-SIRRKERKASVLFVEANMNSEK 433


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,185,854
Number of Sequences: 237096
Number of extensions: 1762859
Number of successful extensions: 5915
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5904
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)