Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0354
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    22   3.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   3.2  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    21   5.6  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    21   5.6  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    21   5.6  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    21   5.6  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    21   5.6  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    21   5.6  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    21   5.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.8  

>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 373 ERLAGTSQLSLWSFSGTSGQKLWI 444
           ERLA + +  + + SG   +K+W+
Sbjct: 95  ERLAFSQEEEVLTLSGDFAEKIWV 118


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 358 KQRRYERLAGTSQLSLWSFSG 420
           ++RR +RLAG   +++W  +G
Sbjct: 148 RRRRSKRLAGLMIVAVWVLAG 168



 Score = 21.0 bits (42), Expect = 7.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 107 GIIPRMVASHHRTLGDVHEPNVR 175
           G I  ++AS HR L      NVR
Sbjct: 219 GRISCVIASRHRNLEATESENVR 241


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 310 RNKLRNDRKSRHRRIKKQRRYERLAGTSQ 396
           RN+    R+      K +R Y++   TS+
Sbjct: 36  RNRYSRSREREQNSYKNEREYQKYRETSK 64


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 310 RNKLRNDRKSRHRRIKKQRRYERLAGTSQ 396
           RN+    R+      K +R Y++   TS+
Sbjct: 36  RNRYSRSREREQNSYKNEREYQKYRETSK 64


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 310 RNKLRNDRKSRHRRIKKQRRYERLAGTSQ 396
           RN+    R+      K +R Y++   TS+
Sbjct: 36  RNRYSRSREREQNSYKNEREYQKYRETSK 64


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 310 RNKLRNDRKSRHRRIKKQRRYERLAGTSQ 396
           RN+    R+      K +R Y++   TS+
Sbjct: 36  RNRYSRSREREQNSYKNEREYQKYRETSK 64


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 310 RNKLRNDRKSRHRRIKKQRRYERLAGTSQ 396
           RN+    R+      K +R Y++   TS+
Sbjct: 36  RNRYSRSREREQNSYKNEREYQKYRETSK 64


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 310 RNKLRNDRKSRHRRIKKQRRYERLAGTSQ 396
           RN+    R+      K +R Y++   TS+
Sbjct: 36  RNRYSRSREREQNSYKNEREYQKYRETSK 64


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 310 RNKLRNDRKSRHRRIKKQRRYERLAGTSQ 396
           RN+    R+      K +R Y++   TS+
Sbjct: 36  RNRYSRSREREQNSYKNEREYQKYRETSK 64


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 132 RTTGRSETCMNQMSETAVPLVLSS 203
           +  G+   C N MSE  V ++L +
Sbjct: 170 KENGKEFDCHNYMSELTVDILLET 193


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,077
Number of Sequences: 438
Number of extensions: 3014
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)