Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0352
         (597 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   2.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   3.2  
AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450 CY...    23   5.7  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 342 HNPADGSSHHRPLGRVHEPNVRNCGSSRTGSIT 244
           H+P +G  ++ P G  + P   N G+   GS T
Sbjct: 373 HSPVNGYGNNHPTGGSNLPGNNNGGAGGGGSNT 405


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 290 SCTRPSGRWCELPSAGLCL 346
           SC RP G  C  P  G C+
Sbjct: 594 SCDRPGGLLCSGPDHGRCV 612


>AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450
           CYP6Z1 protein.
          Length = 494

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 469 RDATSKPIWIAEIVLSVFFLTRASRLRSPD 558
           RD  S+  ++ ++V SVFF   A+ L  PD
Sbjct: 169 RDIVSR--YVLDVVASVFFGFEANCLHDPD 196


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,566
Number of Sequences: 2352
Number of extensions: 12286
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)