Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0352
         (597 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g54020.2 68414.m06155 myrosinase-associated protein, putative...    28   4.1  
At1g67970.1 68414.m07764 heat shock factor protein, putative (HS...    28   5.4  
At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putat...    27   7.2  
At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei...    27   7.2  
At1g35510.1 68414.m04407 expressed protein contains Pfam PF03138...    27   9.5  
At1g14740.1 68414.m01762 expressed protein                             27   9.5  

>At1g54020.2 68414.m06155 myrosinase-associated protein, putative
           strong similarity to myrosinase-associated proteins
           GI:1769968, GI:1769970, GI:1216389,GI:1216391 from
           [Brassica napus]; contains InterPro Entry IPR001087
           Lipolytic enzyme, G-D-S-L family
          Length = 372

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 56  LACGSQAFIATLLFDPSMSALPIIANKDSPSVGLFT 163
           + C S + +  LL  P +  L  I+ ++ P+VGLFT
Sbjct: 1   MECSSVSVLGILLVFPLLHNLVTISGQNLPAVGLFT 36


>At1g67970.1 68414.m07764 heat shock factor protein, putative (HSF5)
           / heat shock transcription factor, putative (HSTF5)
           identical to heat shock transcription factor 5 (HSF5)
           SP:Q9S7U5 from [Arabidopsis thaliana]; contains Pfam
           profile: PF00447 HSF-type DNA-binding domain
          Length = 374

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 308 GRWCELPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCD 439
           G W +L         +K + ++ + GKD LT+E  E  G+ + D
Sbjct: 286 GAWEKLLLLSPSRKKTKKQENIVKKGKDDLTLEEEEEDGTMELD 329


>At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putative
           / CPA-FA synthase, putative similar to cyclopropane
           synthase [Sterculia foetida] GI:21069167; contains Pfam
           profiles PF02353: Cyclopropane-fatty-acyl-phospholipid
           synthase, PF01593: amine oxidase, flavin-containing
          Length = 867

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 459 IQNARRDVEAHLDRGDRAIGFFLNTCITAPKSGYNS 566
           +  ARR++  H D  +   GFFL+  +T   + + S
Sbjct: 569 LTQARRNISRHYDLSNELFGFFLDDTMTYSSAVFKS 604


>At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein /
           hsp20 family protein contains Pfam profile: PF00011
           Hsp20/alpha crystallin family
          Length = 285

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 357 RPKPA*PNPARICSLWSPESREALNNVTLLVAFRIQNAR-RDVEAHLD 497
           RPK   P  A + ++WSP S  A +  + +VA  +  A   D+   +D
Sbjct: 169 RPKLDLPKLANLGTVWSPRSNVAESTHSYVVAIELPGASINDIRVEVD 216


>At1g35510.1 68414.m04407 expressed protein contains Pfam PF03138:
           Plant protein family. The function of this family of
           plant proteins is unknown; previously annotated as
           'growth regulator protein -related'  based on similarity
           to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana
           tabacum], which, due to scienitific fraud was retracted.
           Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908.
           PMID:10400497.
          Length = 568

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 114 ADIEGSKSNVAMNAWLPQ 61
           AD+ GS  NV M AW P+
Sbjct: 122 ADVNGSSHNVLMEAWKPR 139


>At1g14740.1 68414.m01762 expressed protein
          Length = 733

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 320 ELPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSK--QCDFTSRVSHSKRETRRRS 487
           EL  + LC N+ K   SL + GK+++T     S   K  + DF +    +   ++R++
Sbjct: 69  ELTLSYLCENSGKLAESLGQKGKEVVTFSENSSYDDKWVERDFFNLREMNPNSSKRKA 126


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,099,344
Number of Sequences: 28952
Number of extensions: 272248
Number of successful extensions: 681
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)