Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0350
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   0.89 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.8  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.3  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = +3

Query: 492 SRWSLCSPARLSA-PTR 539
           SRWSLC+ AR +  PTR
Sbjct: 366 SRWSLCNSARSNKYPTR 382


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 183 YITMHIRFCNPYYMDFLFVDRYNHYPSLVICIRLF 287
           ++T ++ F    Y   L V R+N+Y SL   +R+F
Sbjct: 498 FVTTYLMFD---YCTVLRVQRFNNYQSLAHYLRVF 529


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = -2

Query: 552 TPQTLASALIDELDCTRTTSTPC*RYWTESNPSTTQ*KSNVSYP 421
           T QT  + +   ++C   TS+P   Y   + P+ +Q  + +  P
Sbjct: 309 TVQTPTTVMSPTINCWSLTSSPPPPYQISAQPTPSQSPNQIYQP 352


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 482  KDTGQKVTHPLRNENQMSH 426
            K T QK+   LRN+N +SH
Sbjct: 1250 KPTSQKIVPNLRNQN-LSH 1267


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 492 TPC*RYWTESNPSTTQ 445
           T C RYWT  N + T+
Sbjct: 110 TSCTRYWTCWNGTATE 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,814
Number of Sequences: 336
Number of extensions: 3022
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)