Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0350
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    24   4.5  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   4.5  

>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 494 RHRAKDTGQKVTHPLRNENQMSHIPDAGGSKTSP 393
           RH A + G   +HP R+    S    +G S +SP
Sbjct: 111 RHIAGEIGLDRSHPNRSTTASSEQACSGSSSSSP 144


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 1/111 (0%)
 Frame = -3

Query: 458 HPLRNENQMSHIPDAGGSKTSPVSLVNDYKHIICLTNES-GLDSLIYPLSKRNTFLVNE* 282
           H  R  NQ SH            SLV+ ++  I    E   L    Y    + T +  E 
Sbjct: 165 HVQRLSNQRSHYKRIQCYSLKQRSLVDAFQKTIRKAEEVLNLVYNKYIFEWQKTQMFPEV 224

Query: 281 SNTNN*TRIMIVSIHKQEVHIVWVAKPDMHRYIRLTLLVIYFTEISKGFWK 129
            +TN  +   I + ++    I+W  K  +H  ++  L      EI+   WK
Sbjct: 225 RSTNAYSLDEIQTWYESLAAIMWNTKDQIHLTMKSQLREHVSQEINSDLWK 275


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,695
Number of Sequences: 2352
Number of extensions: 12612
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)