Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0348
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 166 1e-41
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 166 1e-41
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 165 2e-41
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 165 2e-41
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 165 2e-41
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 165 2e-41
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 165 2e-41
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 165 2e-41
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 165 2e-41
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 165 2e-41
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 154 4e-38
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 112 2e-25
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 102 2e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 79 3e-15
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 43 2e-04
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 42 3e-04
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.51
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 30 1.5
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 29 2.7
AF016673-2|ABS19461.1| 320|Caenorhabditis elegans Hypothetical ... 28 4.7
AF016673-1|AAB66121.1| 441|Caenorhabditis elegans Hypothetical ... 28 4.7
Z29117-15|CAA82385.1| 193|Caenorhabditis elegans Hypothetical p... 28 6.2
Z29117-14|CAA82386.1| 190|Caenorhabditis elegans Hypothetical p... 28 6.2
Z22179-16|CAA80172.1| 193|Caenorhabditis elegans Hypothetical p... 28 6.2
Z22179-15|CAA80173.1| 190|Caenorhabditis elegans Hypothetical p... 28 6.2
Z70208-7|CAA94139.1| 287|Caenorhabditis elegans Hypothetical pr... 27 8.2
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 27 8.2
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 27 8.2
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 166 bits (403), Expect = 1e-41
Identities = 78/80 (97%), Positives = 80/80 (100%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 330
+TGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE
Sbjct: 149 TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
Query: 329 IVRDIKEKLCYVALDFEQEM 270
IVRDIKEKLCYVALDFEQEM
Sbjct: 209 IVRDIKEKLCYVALDFEQEM 228
Score = 74.5 bits (175), Expect = 5e-14
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -1
Query: 252 TSLEKSYELPDGQVITIGNERFRCPEALFQPSFL*MIKFG 133
+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFL M G
Sbjct: 235 SSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
P+ +REKMTQIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR 148
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 166 bits (403), Expect = 1e-41
Identities = 78/80 (97%), Positives = 80/80 (100%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 330
+TGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE
Sbjct: 149 TTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
Query: 329 IVRDIKEKLCYVALDFEQEM 270
IVRDIKEKLCYVALDFEQEM
Sbjct: 209 IVRDIKEKLCYVALDFEQEM 228
Score = 74.5 bits (175), Expect = 5e-14
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -1
Query: 252 TSLEKSYELPDGQVITIGNERFRCPEALFQPSFL*MIKFG 133
+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFL M G
Sbjct: 235 SSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
P+ +REKMTQIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR 148
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 77/80 (96%), Positives = 80/80 (100%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 330
+TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE
Sbjct: 149 TTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
Query: 329 IVRDIKEKLCYVALDFEQEM 270
IVRDIKEKLCYVALDFEQEM
Sbjct: 209 IVRDIKEKLCYVALDFEQEM 228
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = -1
Query: 252 TSLEKSYELPDGQVITIGNERFRCPEALFQPSFL*MIKFG 133
+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFL M G
Sbjct: 235 SSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
P+ +REKMTQIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR 148
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 77/80 (96%), Positives = 80/80 (100%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 330
+TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE
Sbjct: 149 TTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
Query: 329 IVRDIKEKLCYVALDFEQEM 270
IVRDIKEKLCYVALDFEQEM
Sbjct: 209 IVRDIKEKLCYVALDFEQEM 228
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = -1
Query: 252 TSLEKSYELPDGQVITIGNERFRCPEALFQPSFL*MIKFG 133
+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFL M G
Sbjct: 235 SSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
P+ +REKMTQIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR 148
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 77/80 (96%), Positives = 80/80 (100%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 330
+TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE
Sbjct: 149 TTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
Query: 329 IVRDIKEKLCYVALDFEQEM 270
IVRDIKEKLCYVALDFEQEM
Sbjct: 209 IVRDIKEKLCYVALDFEQEM 228
Score = 74.5 bits (175), Expect = 5e-14
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -1
Query: 252 TSLEKSYELPDGQVITIGNERFRCPEALFQPSFL*MIKFG 133
+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFL M G
Sbjct: 235 SSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
P+ +REKMTQIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR 148
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 165 bits (402), Expect = 2e-41
Identities = 77/80 (96%), Positives = 80/80 (100%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 330
+TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE
Sbjct: 149 TTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
Query: 329 IVRDIKEKLCYVALDFEQEM 270
IVRDIKEKLCYVALDFEQEM
Sbjct: 209 IVRDIKEKLCYVALDFEQEM 228
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = -1
Query: 252 TSLEKSYELPDGQVITIGNERFRCPEALFQPSFL*MIKFG 133
+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFL M G
Sbjct: 235 SSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
P+ +REKMTQIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR 148
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 77/80 (96%), Positives = 80/80 (100%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 330
+TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE
Sbjct: 149 TTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
Query: 329 IVRDIKEKLCYVALDFEQEM 270
IVRDIKEKLCYVALDFEQEM
Sbjct: 209 IVRDIKEKLCYVALDFEQEM 228
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = -1
Query: 252 TSLEKSYELPDGQVITIGNERFRCPEALFQPSFL*MIKFG 133
+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFL M G
Sbjct: 235 SSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
P+ +REKMTQIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR 148
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 165 bits (402), Expect = 2e-41
Identities = 77/80 (96%), Positives = 80/80 (100%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 330
+TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE
Sbjct: 105 TTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 164
Query: 329 IVRDIKEKLCYVALDFEQEM 270
IVRDIKEKLCYVALDFEQEM
Sbjct: 165 IVRDIKEKLCYVALDFEQEM 184
Score = 74.5 bits (175), Expect = 5e-14
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -1
Query: 252 TSLEKSYELPDGQVITIGNERFRCPEALFQPSFL*MIKFG 133
+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFL M G
Sbjct: 191 SSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 230
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
P+ +REKMTQIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 69 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR 104
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 165 bits (402), Expect = 2e-41
Identities = 77/80 (96%), Positives = 80/80 (100%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 330
+TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE
Sbjct: 135 TTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 194
Query: 329 IVRDIKEKLCYVALDFEQEM 270
IVRDIKEKLCYVALDFEQEM
Sbjct: 195 IVRDIKEKLCYVALDFEQEM 214
Score = 74.5 bits (175), Expect = 5e-14
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -1
Query: 252 TSLEKSYELPDGQVITIGNERFRCPEALFQPSFL*MIKFG 133
+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFL M G
Sbjct: 221 SSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 260
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
P+ +REKMTQIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 99 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR 134
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 165 bits (402), Expect = 2e-41
Identities = 77/80 (96%), Positives = 80/80 (100%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 330
+TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE
Sbjct: 149 TTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
Query: 329 IVRDIKEKLCYVALDFEQEM 270
IVRDIKEKLCYVALDFEQEM
Sbjct: 209 IVRDIKEKLCYVALDFEQEM 228
Score = 74.5 bits (175), Expect = 5e-14
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -1
Query: 252 TSLEKSYELPDGQVITIGNERFRCPEALFQPSFL*MIKFG 133
+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFL M G
Sbjct: 235 SSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
P+ +REKMTQIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 113 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR 148
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 154 bits (374), Expect = 4e-38
Identities = 71/80 (88%), Positives = 77/80 (96%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 330
+TGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAERE
Sbjct: 148 TTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAERE 207
Query: 329 IVRDIKEKLCYVALDFEQEM 270
IVRDIKEKLCYVA DFE E+
Sbjct: 208 IVRDIKEKLCYVAHDFESEL 227
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = -1
Query: 252 TSLEKSYELPDGQVITIGNERFRCPEALFQPSFL*M 145
+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+ M
Sbjct: 234 SSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGM 269
Score = 67.7 bits (158), Expect = 6e-12
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
P+ +REKMTQIMFETFN+PAMYV IQAVLSLYASGR
Sbjct: 112 PKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGR 147
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 112 bits (269), Expect = 2e-25
Identities = 48/78 (61%), Positives = 63/78 (80%)
Frame = -2
Query: 506 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 327
TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E
Sbjct: 153 TGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFET 212
Query: 326 VRDIKEKLCYVALDFEQE 273
VR +KEKLCY+A D EQE
Sbjct: 213 VRQMKEKLCYIAYDVEQE 230
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASG 512
P +REKM Q+MFE + ++YVA+QAVL+LYA G
Sbjct: 116 PNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQG 150
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = -1
Query: 252 TSLEKSYELPDGQVITIGNERFRCPEALFQPSFL*MIKFG 133
T L + Y LPDG+VI +G ERF PE LFQP + + K G
Sbjct: 238 TVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAG 277
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 102 bits (244), Expect = 2e-22
Identities = 45/75 (60%), Positives = 59/75 (78%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 330
+TG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E E
Sbjct: 152 TTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFE 211
Query: 329 IVRDIKEKLCYVALD 285
IVR++KE CY+ALD
Sbjct: 212 IVREMKENACYLALD 226
Score = 51.6 bits (118), Expect = 4e-07
Identities = 22/36 (61%), Positives = 29/36 (80%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
P +RE+ +I FETFN PA+Y+ +QAVLSLYA+GR
Sbjct: 116 PLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGR 151
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 273 DGHRCRPTSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 151
D + S++ SY LPD I I N FR PE LF+P +
Sbjct: 226 DPTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLI 266
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/81 (40%), Positives = 52/81 (64%)
Frame = -2
Query: 515 RSSTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 336
RS TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++
Sbjct: 168 RSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQS 227
Query: 335 REIVRDIKEKLCYVALDFEQE 273
E+ + IKEK CYV D +E
Sbjct: 228 YEVAKMIKEKFCYVCPDVMKE 248
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = -3
Query: 607 DREKMTQIMFETFNSPAMYVAIQAVLSLYAS 515
+RE +IMFE+FN P +Y+A+QAVL+L AS
Sbjct: 129 NREYTAEIMFESFNVPGLYIAVQAVLALTAS 159
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 44.0 bits (99), Expect = 9e-05
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = -2
Query: 509 STGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTA 339
+TG+V+D G+ V+ VP+ +GY + AI + + + D L L+ Y+F +
Sbjct: 321 TTGVVVDIGERVN-IVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPV 379
Query: 338 EREIVRDIKEKLCYVALDFEQE 273
E+ I+R E+ YV D+++E
Sbjct: 380 EKLILRFALEQTTYVPEDYQKE 401
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/77 (25%), Positives = 42/77 (54%)
Frame = -2
Query: 500 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 321
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 320 DIKEKLCYVALDFEQEM 270
+ KE LC+V+ +F++ M
Sbjct: 204 ECKEDLCFVSQNFDESM 220
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/77 (25%), Positives = 42/77 (54%)
Frame = -2
Query: 500 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 321
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 320 DIKEKLCYVALDFEQEM 270
+ KE LC+V+ +F++ M
Sbjct: 204 ECKEDLCFVSQNFDESM 220
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -3
Query: 613 RGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGR 509
R REK+T+IMFE F PA Y++ VLS +A GR
Sbjct: 136 RARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGR 170
Score = 41.5 bits (93), Expect = 5e-04
Identities = 15/47 (31%), Positives = 33/47 (70%)
Frame = -2
Query: 503 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 363
G+++DSG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 173 GLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 330 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 464
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = -3
Query: 616 PRGDREKMTQIMFETFNSPAMYVAIQAVLSLYASGRPPVSCSTPEMVSPTPYPSTKVTLC 437
P D + Q+M F A A S + S + +PTPYPS++ T+
Sbjct: 120 PGYDLSGLLQVMAMVFQEKCPVFARSAANSATNASATNPSAGSSASSTPTPYPSSQPTM- 178
Query: 436 PTP 428
PTP
Sbjct: 179 PTP 181
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -1
Query: 468 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 289
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 288 RLRAG 274
+ AG
Sbjct: 130 QTDAG 134
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -3
Query: 568 NSPAMYVAIQAVLSLYASGRPPVSCSTPEMVSPTPYPSTKVTLCPTPSSVWTW 410
N+ ++ V + A S+Y+S V C + CP PSS+W+W
Sbjct: 821 NAGSIPVELWAEKSIYSSFWDSVICLNKDKKKLMEAMEHTKGKCPIPSSIWSW 873
>AF016673-2|ABS19461.1| 320|Caenorhabditis elegans Hypothetical
protein T06D4.1b protein.
Length = 320
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 29 PFVHTARRYYRLNDLVRSSDRHAVASRPSALLGS*PNLII*RKEGWKR 172
PF+ AR +YRL+D +S+ A AS ++ P L R G KR
Sbjct: 226 PFLKKARIFYRLSDGAETSEAPAEASARASEAPEAPALPPKRSRGIKR 273
>AF016673-1|AAB66121.1| 441|Caenorhabditis elegans Hypothetical
protein T06D4.1a protein.
Length = 441
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 29 PFVHTARRYYRLNDLVRSSDRHAVASRPSALLGS*PNLII*RKEGWKR 172
PF+ AR +YRL+D +S+ A AS ++ P L R G KR
Sbjct: 347 PFLKKARIFYRLSDGAETSEAPAEASARASEAPEAPALPPKRSRGIKR 394
>Z29117-15|CAA82385.1| 193|Caenorhabditis elegans Hypothetical
protein C48B4.12b protein.
Length = 193
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 520 ASGRPPVSCSTPEMVSPTPYPSTKVTLCPT 431
+ +PP+ E PTP P+T T+ PT
Sbjct: 63 SQNQPPIGNDGEETPKPTPKPTTTTTVKPT 92
>Z29117-14|CAA82386.1| 190|Caenorhabditis elegans Hypothetical
protein C48B4.12a protein.
Length = 190
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 520 ASGRPPVSCSTPEMVSPTPYPSTKVTLCPT 431
+ +PP+ E PTP P+T T+ PT
Sbjct: 60 SQNQPPIGNDGEETPKPTPKPTTTTTVKPT 89
>Z22179-16|CAA80172.1| 193|Caenorhabditis elegans Hypothetical
protein C48B4.12b protein.
Length = 193
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 520 ASGRPPVSCSTPEMVSPTPYPSTKVTLCPT 431
+ +PP+ E PTP P+T T+ PT
Sbjct: 63 SQNQPPIGNDGEETPKPTPKPTTTTTVKPT 92
>Z22179-15|CAA80173.1| 190|Caenorhabditis elegans Hypothetical
protein C48B4.12a protein.
Length = 190
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 520 ASGRPPVSCSTPEMVSPTPYPSTKVTLCPT 431
+ +PP+ E PTP P+T T+ PT
Sbjct: 60 SQNQPPIGNDGEETPKPTPKPTTTTTVKPT 89
>Z70208-7|CAA94139.1| 287|Caenorhabditis elegans Hypothetical
protein F54B11.7 protein.
Length = 287
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -2
Query: 125 PTTPTAVKPPRVGPKTSLNHS-IGSSD 48
PTTP A KP PKTSL+ S GS+D
Sbjct: 69 PTTPPA-KPKEPAPKTSLSKSDSGSAD 94
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 520 ASGRPPVSCSTPEMVSPTPYPSTKVTLCPTPSSVWTWLVA 401
A P SC P PTP P + PTP SV VA
Sbjct: 392 AKSPPDQSCPKPSPTDPTPVP----PVAPTPPSVCPTTVA 427
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 520 ASGRPPVSCSTPEMVSPTPYPSTKVTLCPTPSSVWTWLVA 401
A P SC P PTP P + PTP SV VA
Sbjct: 395 AKSPPDQSCPKPSPTDPTPVP----PVAPTPPSVCPTTVA 430
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,332,859
Number of Sequences: 27780
Number of extensions: 277036
Number of successful extensions: 1118
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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