Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0342
(343 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 29 1.3
01_06_0362 + 28739969-28740232,28740336-28740452,28740560-287406... 29 1.3
07_01_1032 - 8947594-8947769,8947885-8948601,8948973-8949049,894... 28 1.7
03_03_0249 + 15832086-15833261 28 1.7
07_01_0469 - 3552409-3553368 28 2.2
04_03_0200 - 12570414-12570712,12572704-12573007 27 2.9
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 27 2.9
10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998 27 3.9
06_03_1378 + 29705711-29706725,29707139-29707363,29707445-29707554 27 3.9
04_04_0974 + 29831274-29833184 27 3.9
11_04_0301 + 16142236-16142945,16143748-16144247,16144557-161446... 27 5.1
07_03_0072 - 13051145-13052362 27 5.1
07_01_1162 - 11002193-11002274,11002628-11002662,11004285-110044... 27 5.1
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 27 5.1
01_01_0316 + 2565704-2566134,2566682-2566845,2566989-2567152,256... 27 5.1
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 26 6.7
03_02_0882 - 12121917-12124446,12124739-12124919,12125057-121251... 26 6.7
06_01_0015 + 181155-181323,182074-182195,182425-182449,182664-18... 26 8.9
03_06_0085 + 31542601-31542855 26 8.9
03_05_0033 - 20048994-20050049,20050131-20050210,20050324-20050435 26 8.9
03_01_0026 + 246682-246866,247791-247915,248452-248625,249377-24... 26 8.9
02_05_0189 + 26590489-26591529 26 8.9
01_05_0104 + 18148396-18148642,18148797-18148886,18148972-181490... 26 8.9
>07_03_0797 +
21575948-21576042,21576140-21576902,21577134-21577327,
21577667-21577700,21578421-21578485,21579032-21579524
Length = 547
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -2
Query: 306 PLRAALSSNPTLRSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPN-TTSP 136
P L S P + + P RP + AP+ RPR+ T A +P+ T+P
Sbjct: 21 PSELPLPSAPGVSARPADRPVASQAAAPAASARPRAPATSAAAAAAAAAAVPSFLTNP 78
>01_06_0362 +
28739969-28740232,28740336-28740452,28740560-28740660,
28741251-28741322,28741433-28741514,28741607-28741687,
28742548-28742589,28743009-28743047,28743278-28743343,
28743444-28743590,28743638-28743652
Length = 341
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 70 SLVAASEQEYSPALNPVVLIDNGRCGVREVPL 165
S V +E+ Y+P+++PV+L D R G + V L
Sbjct: 185 SFVDKTEKRYNPSMSPVILKDKWRKGSQWVAL 216
>07_01_1032 -
8947594-8947769,8947885-8948601,8948973-8949049,
8949264-8949655,8949746-8950002,8950234-8950921
Length = 768
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 158 FRFLVATTPVQVRLERGRFPVEG--ARPVATEGRAR 259
+ VA PVQ R+E G F +G AR E RAR
Sbjct: 167 YNLAVAKAPVQTRIETGFFTKKGKQAREAIGESRAR 202
>03_03_0249 + 15832086-15833261
Length = 391
Score = 28.3 bits (60), Expect = 1.7
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 306 PLRAALSSNPTLRSVPLARPSVAT-GLAPSTGKRPRSRRTWTGVVATRKR 160
PLR LS+ P P PS A L +TGK PR WT A R
Sbjct: 207 PLRRQLSA-PMPPPAPSPAPSTARRSLDSATGKAPRWIEFWTDAAAAGDR 255
>07_01_0469 - 3552409-3553368
Length = 319
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -2
Query: 306 PLRAALSSNPTLRSVPLARPSVATGLAPSTGKR-PRS-RRTWTGVVATRKRNLPNTTS 139
P A+ + P L VP++ P+ A AP++ R P S W + R+L +++S
Sbjct: 221 PAAPAVPAAPALAPVPVSAPASALSFAPASAVRVPSSGNGGWLPATPSGSRDLSSSSS 278
>04_03_0200 - 12570414-12570712,12572704-12573007
Length = 200
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 255 ARPSVATGLAPSTGKRPRSRRTWTGVVATRKRN 157
ARPS G+A S+G + RS + W T K N
Sbjct: 114 ARPSCNAGIASSSGGKKRS-KAWEDFDITEKEN 145
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 306 PLRAALSSNPTLRSVPLARP-SVATGLAPSTGKRPRSRRTW 187
P L+ P L S P P S A LAPS+ PR W
Sbjct: 357 PAVTLLTRAPPLSSAPKQHPESEAPPLAPSSAPSPREEFAW 397
>10_08_0732 - 20173816-20174137,20175824-20176023,20176099-20176998
Length = 473
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 252 RPSVATGLAPSTGKRPRSRRTWTGVVA 172
RPSV G A +T + P SRR GV A
Sbjct: 101 RPSVLAGAASATTRSPSSRRGGGGVRA 127
>06_03_1378 + 29705711-29706725,29707139-29707363,29707445-29707554
Length = 449
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 309 HPLRAALSSNPTLRSVPLARPSVATGLAPSTGKRP 205
HP+ A SS+P L PSVAT +A P
Sbjct: 31 HPIFGAASSSPIAHRSLLPTPSVATAVAVQVDPPP 65
>04_04_0974 + 29831274-29833184
Length = 636
Score = 27.1 bits (57), Expect = 3.9
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +1
Query: 49 EKKLTRISLVAASEQEYSPALNPVVLIDNGRCGVREVPLXXXXXXXXXXXXTGPFSRRGC 228
E++ R +A SE+E + VL+ NG C +R PL G ++RG
Sbjct: 188 EEESRRSKQLAVSEEETVREMFDKVLLCNGECELR-APL-PAEARNCGVYVKGSGNKRGR 245
Query: 229 QARSDGGSRERDA 267
+ G S E DA
Sbjct: 246 KKGKSGASAEDDA 258
>11_04_0301 +
16142236-16142945,16143748-16144247,16144557-16144649,
16144879-16145005,16145265-16145468,16145587-16145692
Length = 579
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -1
Query: 154 PEHHI---SRYRLKQRDSVLGYIPVRSPLLRKSWLVSFPPLTNM 32
PEHH R + V+G+ P P+L+++ ++ LTN+
Sbjct: 22 PEHHAVYSGRIVTLNKSGVVGHRPAPPPVLQEAQILDVDDLTNL 65
>07_03_0072 - 13051145-13052362
Length = 405
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 343 LAVIFSLRWSLPPA*GCTLKQPDSKERPSRATLRRYGPGTLYGKTAPFKT-NLDRSRRDE 167
L+ + ++RWSLPP+ L+Q + E +R LR F T L+ RRD+
Sbjct: 144 LSPVTAVRWSLPPSLLAALQQSEPLE-TTREKLRATDDTPSRAAVPTFVTPTLETRRRDQ 202
>07_01_1162 -
11002193-11002274,11002628-11002662,11004285-11004419,
11004521-11005048
Length = 259
Score = 26.6 bits (56), Expect = 5.1
Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -2
Query: 342 SRSYLALDGVY--HPLRA-ALSSNPTLRSVPLARPSVATGLAP 223
S + ALDGV HPL AL PTLR V L +G+AP
Sbjct: 8 SGALTALDGVAQPHPLPLPALRFAPTLRVVKLGWCDFPSGMAP 50
>06_03_1511 -
30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 319 WSLPPA*G-CTLKQPDSKERPSRATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEP 155
WS PPA CTL P +K +P L R P ++ L R R +K +P
Sbjct: 57 WSPPPALDVCTLSFP-TKRQPIHRLLARLAPADPDTFLLDYRRFLHRHRGRKKPKP 111
>01_01_0316 +
2565704-2566134,2566682-2566845,2566989-2567152,
2567594-2567720,2568347-2568450
Length = 329
Score = 26.6 bits (56), Expect = 5.1
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 134 TGDVVFGRFRFLVATTPVQVRLERGRFPVEGARPVATEGRARGTLLRVGLLESAALS 304
TGD + G A+ + E GRF + + G + TLL++G LE++ ++
Sbjct: 101 TGDAIGGDVGEGAASQGCWLEPELGRFAFQSYKENPLIGPSSATLLKMGALETSKVT 157
>06_01_0878 +
6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 220 YGKTAPFKTNLDRSRRDEKAEPPE 149
YG + P K NL+ S D AE P+
Sbjct: 613 YGNSTPEKGNLEDSETDSLAESPQ 636
>03_02_0882 -
12121917-12124446,12124739-12124919,12125057-12125134,
12125731-12125764,12125864-12125975,12126053-12126238,
12126505-12126575
Length = 1063
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = -2
Query: 306 PLRAALSSNPTLRSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTS 139
P RA +S+P + L + A +P P +R +W+G T+ T S
Sbjct: 624 PQRARRNSSPPVLPKELTPKAPARKSSPKPSPAPVTRSSWSGGSLTKATTAQKTKS 679
>06_01_0015 +
181155-181323,182074-182195,182425-182449,182664-182828,
183203-183321
Length = 199
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 306 PLRAALSSNPTLRSVPLARPSVATGLAPSTGKRPRSRR 193
P +LSS R + LA+P A GL+ +G+ R RR
Sbjct: 19 PPSPSLSSQWRRRRLTLAQPYCAVGLSFVSGRHLRRRR 56
>03_06_0085 + 31542601-31542855
Length = 84
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 214 SRRGCQARSDGGSRERD 264
S+RGC ARSD G + D
Sbjct: 29 SKRGCTARSDDGQNKPD 45
>03_05_0033 - 20048994-20050049,20050131-20050210,20050324-20050435
Length = 415
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 312 YHPLRAALSSNPTLRSVPLARPSVATGLAPSTGKRPRSRR 193
+ P AA +++P L S +RP T A + R SRR
Sbjct: 5 FSPATAAPAASPALFSASTSRPLSLTAAAAAVSARIPSRR 44
>03_01_0026 +
246682-246866,247791-247915,248452-248625,249377-249467,
249516-250554
Length = 537
Score = 25.8 bits (54), Expect = 8.9
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 312 YHPLRAALSSNPTLRSVPLARPSVATGLA-PSTGKRPRSRRTWTGVVA 172
+ PL LS NP L +PL R A P + P R W+G +A
Sbjct: 205 FQPLDDFLSENPFLSPIPLGRLYENIDPAKPYMLEDPIRRAVWSGSLA 252
>02_05_0189 + 26590489-26591529
Length = 346
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/60 (26%), Positives = 23/60 (38%)
Frame = -2
Query: 309 HPLRAALSSNPTLRSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVI 130
HP L T P PS T LA G+R R + V + ++ T+P +
Sbjct: 7 HPSSNLLLPTTTALPNPSPNPSRVTPLASGRGRRGHHRVCASSVAPAQPASVAQPTAPAL 66
>01_05_0104 +
18148396-18148642,18148797-18148886,18148972-18149072,
18149174-18149287,18149381-18149462,18149592-18149659,
18149747-18149806,18149885-18150009,18150663-18150861,
18150942-18151073,18151152-18151244,18151360-18152244,
18152339-18152664,18153003-18153341,18153911-18153996,
18154054-18154139
Length = 1010
Score = 25.8 bits (54), Expect = 8.9
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1
Query: 82 PLLRKSWLVSFPPLTNMLK 26
P RK WL+ + P++NM++
Sbjct: 930 PASRKPWLMGWQPISNMIR 948
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,113,931
Number of Sequences: 37544
Number of extensions: 202234
Number of successful extensions: 643
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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