Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0342
(343 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC146777-1|AAI46778.1| 1803|Homo sapiens SIPA1L1 protein protein. 30 2.2
BC047775-1|AAH47775.1| 260|Homo sapiens chromosome 11 open read... 30 2.2
AK096287-1|BAC04747.1| 260|Homo sapiens protein ( Homo sapiens ... 30 2.2
AF090990-1|AAD12544.1| 1804|Homo sapiens high-risk human papillo... 30 2.2
AF090989-1|AAD12543.1| 1783|Homo sapiens high-risk human papillo... 30 2.2
AB007900-1|BAA23712.2| 1817|Homo sapiens KIAA0440 protein. 30 2.2
BC146790-1|AAI46791.1| 1460|Homo sapiens centrosomal protein 170... 29 2.9
BC078155-1|AAH78155.1| 417|Homo sapiens CEP170 protein protein. 29 2.9
BC025757-1|AAH25757.1| 473|Homo sapiens Unknown (protein for IM... 29 2.9
BC014590-1|AAH14590.2| 293|Homo sapiens CEP170L protein protein. 29 2.9
AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170... 29 2.9
AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170... 29 2.9
AL606534-2|CAI12945.1| 1460|Homo sapiens centrosomal protein 170... 29 2.9
AL606534-1|CAI12942.1| 1557|Homo sapiens centrosomal protein 170... 29 2.9
AJ310567-1|CAC83946.1| 1544|Homo sapiens phosphoinositide-bindin... 29 2.9
AB022659-1|BAA83380.1| 1460|Homo sapiens KARP-1-binding protein ... 29 2.9
AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein ... 29 2.9
AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein ... 29 2.9
AB007939-1|BAA32315.2| 1472|Homo sapiens KIAA0470 protein protein. 29 2.9
BC027880-1|AAH27880.1| 473|Homo sapiens CENTD3 protein protein. 29 3.8
U89337-3|AAB47488.1| 4289|Homo sapiens tenascin X protein. 28 8.7
BC035596-1|AAH35596.1| 681|Homo sapiens PAK6 protein protein. 28 8.7
AL929593-3|CAI41781.1| 3295|Homo sapiens tenascin XB protein. 28 8.7
AL772248-1|CAI18078.1| 4222|Homo sapiens tenascin XB protein. 28 8.7
AL662884-1|CAI18332.1| 4222|Homo sapiens tenascin XB protein. 28 8.7
AL662849-16|CAI17471.1| 4222|Homo sapiens tenascin XB protein. 28 8.7
AL662828-1|CAI17414.1| 4222|Homo sapiens tenascin XB protein. 28 8.7
AL645922-1|CAI41718.1| 4222|Homo sapiens tenascin XB protein. 28 8.7
AL049547-2|CAB89296.1| 4288|Homo sapiens dJ34F7.1.1 (tenascin XB... 28 8.7
AJ236915-1|CAC18720.1| 681|Homo sapiens pak5 protein protein. 28 8.7
AF276893-1|AAF82800.1| 681|Homo sapiens p21-activated protein k... 28 8.7
>BC146777-1|AAI46778.1| 1803|Homo sapiens SIPA1L1 protein protein.
Length = 1803
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2
Query: 288 SSNPTL-RSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPN 148
S+ P+L +S+PL RPS G+ G+ S + T + TR++ +P+
Sbjct: 1617 STYPSLPKSLPLRRPSYTLGMKSLHGEFSASDSSLTDIQETRRQPMPD 1664
>BC047775-1|AAH47775.1| 260|Homo sapiens chromosome 11 open reading
frame 46 protein.
Length = 260
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 273 LRSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLP 151
LRS+ P T AP TGKR + R T + ++ +P
Sbjct: 149 LRSLQFTNPGRQTEFAPETGKREKRRLTKNATAGSDRQVIP 189
>AK096287-1|BAC04747.1| 260|Homo sapiens protein ( Homo sapiens
cDNA FLJ38968 fis, clone NT2RI2002316. ).
Length = 260
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 273 LRSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLP 151
LRS+ P T AP TGKR + R T + ++ +P
Sbjct: 149 LRSLQFTNPGRQTEFAPETGKREKRRLTKNATAGSDRQVIP 189
>AF090990-1|AAD12544.1| 1804|Homo sapiens high-risk human papilloma
viruses E6 oncoproteins targeted protein E6TP1 beta
protein.
Length = 1804
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2
Query: 288 SSNPTL-RSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPN 148
S+ P+L +S+PL RPS G+ G+ S + T + TR++ +P+
Sbjct: 1617 STYPSLPKSLPLRRPSYTLGMKSLHGEFSASDSSLTDIQETRRQPMPD 1664
>AF090989-1|AAD12543.1| 1783|Homo sapiens high-risk human papilloma
viruses E6 oncoproteins targeted protein E6TP1 alpha
protein.
Length = 1783
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2
Query: 288 SSNPTL-RSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPN 148
S+ P+L +S+PL RPS G+ G+ S + T + TR++ +P+
Sbjct: 1596 STYPSLPKSLPLRRPSYTLGMKSLHGEFSASDSSLTDIQETRRQPMPD 1643
>AB007900-1|BAA23712.2| 1817|Homo sapiens KIAA0440 protein.
Length = 1817
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2
Query: 288 SSNPTL-RSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPN 148
S+ P+L +S+PL RPS G+ G+ S + T + TR++ +P+
Sbjct: 1631 STYPSLPKSLPLRRPSYTLGMKSLHGEFSASDSSLTDIQETRRQPMPD 1678
>BC146790-1|AAI46791.1| 1460|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1460
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 232 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 101
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1245 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1289
>BC078155-1|AAH78155.1| 417|Homo sapiens CEP170 protein protein.
Length = 417
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 232 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 101
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 253 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 297
>BC025757-1|AAH25757.1| 473|Homo sapiens Unknown (protein for
IMAGE:5201730) protein.
Length = 473
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -1
Query: 289 LKQPDSKERPSRATLRRYGPGTLYGKTAPFKTNLDRSRRDEKA---EPPEHHISRYRLKQ 119
+ P RP+ T+ PG LY P T RR+ + EH +SR L+
Sbjct: 182 ISAPTPALRPTTGTVHIMDPGCLYYGVQPVGTPGAPDRRESRGVCQGRAEHRLSRQDLEA 241
Query: 118 RDSVLGYIPVRSP 80
R+ GY + P
Sbjct: 242 REDA-GYASLELP 253
>BC014590-1|AAH14590.2| 293|Homo sapiens CEP170L protein protein.
Length = 293
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 232 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 101
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 78 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 122
>AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1584
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 232 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 101
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1369 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1413
>AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1486
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 232 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 101
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1271 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1315
>AL606534-2|CAI12945.1| 1460|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1460
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 232 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 101
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1245 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1289
>AL606534-1|CAI12942.1| 1557|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1557
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 232 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 101
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1342 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1386
>AJ310567-1|CAC83946.1| 1544|Homo sapiens phosphoinositide-binding
proteins protein.
Length = 1544
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -1
Query: 289 LKQPDSKERPSRATLRRYGPGTLYGKTAPFKTNLDRSRRDEKA---EPPEHHISRYRLKQ 119
+ P RP+ T+ PG LY P T RR+ + EH +SR L+
Sbjct: 182 ISAPTPALRPTTGTVHIMDPGCLYYGVQPVGTPGAPDRRESRGVCQGRAEHRLSRQDLEA 241
Query: 118 RDSVLGYIPVRSP 80
R+ GY + P
Sbjct: 242 REDA-GYASLELP 253
>AB022659-1|BAA83380.1| 1460|Homo sapiens KARP-1-binding protein 3
protein.
Length = 1460
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 232 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 101
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1245 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1289
>AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein 2
(KAB2) protein.
Length = 1486
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 232 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 101
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1271 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1315
>AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein 1
(KAB1) protein.
Length = 1584
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 232 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 101
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1369 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1413
>AB007939-1|BAA32315.2| 1472|Homo sapiens KIAA0470 protein protein.
Length = 1472
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 232 PGTLYGKTAPFKTNLDRSRRDEKAEPPEH-HISRYRLKQRDSVLG 101
P ++ KT R + AEPP+H I+R R RD V+G
Sbjct: 1257 PPLVHSKTPEGNNGRSGDPRPQAAEPPDHLTITRRRTWSRDEVMG 1301
>BC027880-1|AAH27880.1| 473|Homo sapiens CENTD3 protein protein.
Length = 473
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -1
Query: 289 LKQPDSKERPSRATLRRYGPGTLYGKTAPFKTNLDRSRRDEKA---EPPEHHISRYRLKQ 119
+ P RP+ T+ PG LY P T RR+ + EH +SR L+
Sbjct: 182 ISAPTPALRPTTGTVHIMDPGCLYYGVQPVGTPGAPHRRESRGVCQGRAEHRLSRQDLEA 241
Query: 118 RDSVLGYIPVRSP 80
R+ GY + P
Sbjct: 242 REDA-GYASLELP 253
>U89337-3|AAB47488.1| 4289|Homo sapiens tenascin X protein.
Length = 4289
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = -1
Query: 253 ATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDSVLGYIPVRSPLL 74
A +RYGP T G TAP + K EPP L +V G P L
Sbjct: 1318 ANKKRYGPLTADGTTAP----------ERKEEPPRPEFLEQPLLGELTVTGVTP---DSL 1364
Query: 73 RKSWLVSFPPLTNML 29
R SW V+ P + +
Sbjct: 1365 RLSWTVAQGPFDSFM 1379
>BC035596-1|AAH35596.1| 681|Homo sapiens PAK6 protein protein.
Length = 681
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 318 GVYHPLRAALSSNP--TLRSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLP 151
G + PL + +S+P +LR+ P ATG P S RTW ++T LP
Sbjct: 316 GTFSPLTTSDTSSPQKSLRTAP------ATGQLPGRSSPAGSPRTWHAQISTSNLYLP 367
>AL929593-3|CAI41781.1| 3295|Homo sapiens tenascin XB protein.
Length = 3295
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = -1
Query: 253 ATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDSVLGYIPVRSPLL 74
A +RYGP T G TAP + K EPP L +V G P L
Sbjct: 304 ANKKRYGPLTADGTTAP----------ERKEEPPRPEFLEQPLLGELTVTGVTP---DSL 350
Query: 73 RKSWLVSFPPLTNML 29
R SW V+ P + +
Sbjct: 351 RLSWTVAQGPFDSFM 365
>AL772248-1|CAI18078.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = -1
Query: 253 ATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDSVLGYIPVRSPLL 74
A +RYGP T G TAP + K EPP L +V G P L
Sbjct: 1231 ANKKRYGPLTADGTTAP----------ERKEEPPRPEFLEQPLLGELTVTGVTP---DSL 1277
Query: 73 RKSWLVSFPPLTNML 29
R SW V+ P + +
Sbjct: 1278 RLSWTVAQGPFDSFM 1292
>AL662884-1|CAI18332.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = -1
Query: 253 ATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDSVLGYIPVRSPLL 74
A +RYGP T G TAP + K EPP L +V G P L
Sbjct: 1231 ANKKRYGPLTADGTTAP----------ERKEEPPRPEFLEQPLLGELTVTGVTP---DSL 1277
Query: 73 RKSWLVSFPPLTNML 29
R SW V+ P + +
Sbjct: 1278 RLSWTVAQGPFDSFM 1292
>AL662849-16|CAI17471.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = -1
Query: 253 ATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDSVLGYIPVRSPLL 74
A +RYGP T G TAP + K EPP L +V G P L
Sbjct: 1231 ANKKRYGPLTADGTTAP----------ERKEEPPRPEFLEQPLLGELTVTGVTP---DSL 1277
Query: 73 RKSWLVSFPPLTNML 29
R SW V+ P + +
Sbjct: 1278 RLSWTVAQGPFDSFM 1292
>AL662828-1|CAI17414.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = -1
Query: 253 ATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDSVLGYIPVRSPLL 74
A +RYGP T G TAP + K EPP L +V G P L
Sbjct: 1231 ANKKRYGPLTADGTTAP----------ERKEEPPRPEFLEQPLLGELTVTGVTP---DSL 1277
Query: 73 RKSWLVSFPPLTNML 29
R SW V+ P + +
Sbjct: 1278 RLSWTVAQGPFDSFM 1292
>AL645922-1|CAI41718.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = -1
Query: 253 ATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDSVLGYIPVRSPLL 74
A +RYGP T G TAP + K EPP L +V G P L
Sbjct: 1231 ANKKRYGPLTADGTTAP----------ERKEEPPRPEFLEQPLLGELTVTGVTP---DSL 1277
Query: 73 RKSWLVSFPPLTNML 29
R SW V+ P + +
Sbjct: 1278 RLSWTVAQGPFDSFM 1292
>AL049547-2|CAB89296.1| 4288|Homo sapiens dJ34F7.1.1 (tenascin XB
(isoform 1)) protein.
Length = 4288
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/75 (32%), Positives = 30/75 (40%)
Frame = -1
Query: 253 ATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDSVLGYIPVRSPLL 74
A +RYGP T G TAP + K EPP L +V G P L
Sbjct: 1317 ANKKRYGPLTADGTTAP----------ERKEEPPRPEFLEQPLLGELTVTGVTP---DSL 1363
Query: 73 RKSWLVSFPPLTNML 29
R SW V+ P + +
Sbjct: 1364 RLSWTVAQGPFDSFM 1378
>AJ236915-1|CAC18720.1| 681|Homo sapiens pak5 protein protein.
Length = 681
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 318 GVYHPLRAALSSNP--TLRSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLP 151
G + PL + +S+P +LR+ P ATG P S RTW ++T LP
Sbjct: 316 GTFSPLTTSDTSSPQKSLRTAP------ATGQLPGRSSPAGSPRTWHAQISTSNLYLP 367
>AF276893-1|AAF82800.1| 681|Homo sapiens p21-activated protein
kinase 6 protein.
Length = 681
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 318 GVYHPLRAALSSNP--TLRSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLP 151
G + PL + +S+P +LR+ P ATG P S RTW ++T LP
Sbjct: 316 GTFSPLTTSDTSSPQKSLRTAP------ATGQLPGRSSPAGSPRTWHAQISTSNLYLP 367
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,517,503
Number of Sequences: 237096
Number of extensions: 1049067
Number of successful extensions: 3342
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3341
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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