Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0342
         (343 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-677|AAF51061.1| 3115|Drosophila melanogaster CG3921-PA ...    29   1.2  
AY128429-1|AAM75022.1|  953|Drosophila melanogaster GH26723p pro...    28   3.7  
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro...    28   3.7  
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ...    28   3.7  
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot...    28   3.7  
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ...    28   3.7  
AE014134-3116|AAF53814.1| 1309|Drosophila melanogaster CG10188-P...    28   3.7  
AE014134-3115|AAN11046.2| 1309|Drosophila melanogaster CG10188-P...    28   3.7  
AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA...    27   6.4  
AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-P...    27   6.4  
AE014298-590|AAN09115.1|  432|Drosophila melanogaster CG32790-PA...    27   8.4  

>AE014134-677|AAF51061.1| 3115|Drosophila melanogaster CG3921-PA
            protein.
          Length = 3115

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -2

Query: 321  DGVYHPLRAALSSNPTLRSV-PLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNT 145
            D  Y  +R++ +     R+  PLA+P  A  +AP+ G  P  RR  T      + + P T
Sbjct: 3010 DSYYTAVRSSKAPVSHYRTPRPLAQPPAAPNVAPAGG--PAQRRPKTVYQTASEESSPTT 3067

Query: 144  TSPV 133
             SP+
Sbjct: 3068 PSPL 3071


>AY128429-1|AAM75022.1|  953|Drosophila melanogaster GH26723p
           protein.
          Length = 953

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +3

Query: 3   IREDHPPNLSILVSGGKETNQDFLSSGERTGI*PSTESRCFNR*REMWCSGGSA 164
           +  +HPP  ++L     ET+     SG  TG    +    F+R +E W SG S+
Sbjct: 740 VSNNHPPPAALL-DDSHETDNGLSGSG--TGSSTPSVGGTFDRRKEKWLSGSSS 790


>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p
           protein.
          Length = 2176

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 288 SSNPTLRSVPLARPSVATGLAPSTGK-RPRSRRTWTGVVATRKRNLPNTTSPVI 130
           S +PT+   P   P+ A       G+ RP++R + +    TR   L    SPVI
Sbjct: 309 SISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNSSSPATTTRATRLSKAGSPVI 362


>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
           protein.
          Length = 2342

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 288 SSNPTLRSVPLARPSVATGLAPSTGK-RPRSRRTWTGVVATRKRNLPNTTSPVI 130
           S +PT+   P   P+ A       G+ RP++R + +    TR   L    SPVI
Sbjct: 433 SISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNSSSPATTTRATRLSKAGSPVI 486


>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
           EAST protein.
          Length = 2362

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 288 SSNPTLRSVPLARPSVATGLAPSTGK-RPRSRRTWTGVVATRKRNLPNTTSPVI 130
           S +PT+   P   P+ A       G+ RP++R + +    TR   L    SPVI
Sbjct: 486 SISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNSSSPATTTRATRLSKAGSPVI 539


>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
           protein.
          Length = 2301

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 288 SSNPTLRSVPLARPSVATGLAPSTGK-RPRSRRTWTGVVATRKRNLPNTTSPVI 130
           S +PT+   P   P+ A       G+ RP++R + +    TR   L    SPVI
Sbjct: 433 SISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNSSSPATTTRATRLSKAGSPVI 486


>AE014134-3116|AAF53814.1| 1309|Drosophila melanogaster CG10188-PB,
            isoform B protein.
          Length = 1309

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +3

Query: 3    IREDHPPNLSILVSGGKETNQDFLSSGERTGI*PSTESRCFNR*REMWCSGGSA 164
            +  +HPP  ++L     ET+     SG  TG    +    F+R +E W SG S+
Sbjct: 1096 VSNNHPPPAALL-DDSHETDNGLSGSG--TGSSTPSVGGTFDRRKEKWLSGSSS 1146


>AE014134-3115|AAN11046.2| 1309|Drosophila melanogaster CG10188-PA,
            isoform A protein.
          Length = 1309

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +3

Query: 3    IREDHPPNLSILVSGGKETNQDFLSSGERTGI*PSTESRCFNR*REMWCSGGSA 164
            +  +HPP  ++L     ET+     SG  TG    +    F+R +E W SG S+
Sbjct: 1096 VSNNHPPPAALL-DDSHETDNGLSGSG--TGSSTPSVGGTFDRRKEKWLSGSSS 1146


>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
            protein.
          Length = 2112

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 282  NPTLRSVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVI 130
            NPT  SVP   P+       +T   P  + T TG   T    LP+TT+  I
Sbjct: 1671 NPTTTSVPGYNPTTTPIPVETTTSTPGYKPTTTGEPIT-TTTLPSTTTDAI 1720


>AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-PA
            protein.
          Length = 1377

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -2

Query: 306  PLRAALSSNPTLRSVPLARPSVATGLAP 223
            PL++  SS P   ++P+A P + +GL P
Sbjct: 1065 PLKSTPSSAPPTCTLPVAAPPILSGLPP 1092


>AE014298-590|AAN09115.1|  432|Drosophila melanogaster CG32790-PA
           protein.
          Length = 432

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -2

Query: 267 SVPLARPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLP 151
           +VP A PS  +  APS     ++R  W+ +V+ +++  P
Sbjct: 382 AVPAAGPSTPSTPAPSYSPGSQNRGKWSKIVSHKQKPKP 420


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,843,319
Number of Sequences: 53049
Number of extensions: 308104
Number of successful extensions: 854
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)