Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0341
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    55   1e-06
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    40   0.052
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    36   1.1  
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    34   2.6  
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    34   2.6  
UniRef50_A5LFU4 Cluster: Putative uncharacterized protein; n=2; ...    33   6.0  
UniRef50_A0B8I7 Cluster: DEAD/DEAH box helicase domain protein; ...    33   6.0  
UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subuni...    33   7.9  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 32/59 (54%), Positives = 36/59 (61%)
 Frame = -3

Query: 180 GAPTARRTNATTSFLTATILVYXXXXXXXXXXXTRLALQLFLVKIFKVYSFRLRGLVRV 4
           G P AR  + TTSFLTA  L+Y           TRLALQ  LVK FKV SF+L+GL RV
Sbjct: 30  GGPPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERV 88


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
           Predicted protein - Nematostella vectensis
          Length = 79

 Score = 39.9 bits (89), Expect = 0.052
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = +3

Query: 528 FHQSRTKVRGSKAIRYRPSSNRK 596
           F   RTKVRGSK IRYRPSSN K
Sbjct: 6   FRCQRTKVRGSKTIRYRPSSNHK 28


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = +3

Query: 528 FHQSRTKVRGSKAIRYRPSSNRK 596
           FH  RTKV GSK IRY PS N K
Sbjct: 6   FHCQRTKVGGSKMIRYHPSLNHK 28


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -2

Query: 523 LWQMLR*CSSCDDPRISPLTSQYECPQ 443
           L +  R C S ++ RISPLTS+Y+CPQ
Sbjct: 258 LGKCFRSCLSPENLRISPLTSEYKCPQ 284


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -2

Query: 106 SWNYRGCWHQTCP 68
           SWNYR CWHQT P
Sbjct: 7   SWNYRSCWHQTGP 19


>UniRef50_A5LFU4 Cluster: Putative uncharacterized protein; n=2;
           Streptococcus pneumoniae|Rep: Putative uncharacterized
           protein - Streptococcus pneumoniae SP3-BS71
          Length = 81

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 28/75 (37%), Positives = 35/75 (46%)
 Frame = +2

Query: 116 YTKIVAVKKLVVAFVRRAVGAPHPR*Y*HVCGHIVGEPAF*KTPVQFKILSRCSSVSVEV 295
           Y K+VAVKKLVV    R            + G I     F   P    +L+   S+ +  
Sbjct: 13  YIKVVAVKKLVVELWAR------------LAGPIFSCTGFPTGPF---LLANLESLWLLA 57

Query: 296 GRQFYFEQIRVLKAG 340
            R FYFE+IRV KAG
Sbjct: 58  NRDFYFEKIRVFKAG 72


>UniRef50_A0B8I7 Cluster: DEAD/DEAH box helicase domain protein;
           n=1; Methanosaeta thermophila PT|Rep: DEAD/DEAH box
           helicase domain protein - Methanosaeta thermophila
           (strain DSM 6194 / PT) (Methanothrixthermophila (strain
           DSM 6194 / PT))
          Length = 820

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 474 EILGSSQDEHQR-SICQRCFHQSRTKVRGSKAIRYR 578
           E+L + Q +H+R S+CQ C  + R K+ G  ++ YR
Sbjct: 82  ELLNAYQLKHRRVSVCQHCLGRRRVKLLGEDSVSYR 117


>UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subunit
           p20; n=1; Polaromonas naphthalenivorans CJ2|Rep:
           Peptidase C14, caspase catalytic subunit p20 -
           Polaromonas naphthalenivorans (strain CJ2)
          Length = 562

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 202 VSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 104
           V+  PR+R  D AA + NY L NR+N+ +  W+
Sbjct: 163 VNAPPRVRAADPAAVQANY-LANRSNYEVSQWT 194


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,937,946
Number of Sequences: 1657284
Number of extensions: 10603908
Number of successful extensions: 23410
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23403
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)