Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0334
         (478 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    42   0.007
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    40   0.028
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    36   0.61 
UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;...    32   7.5  
UniRef50_Q5D970 Cluster: SJCHGC08915 protein; n=1; Schistosoma j...    32   7.5  
UniRef50_Q10409 Cluster: UPF0293 protein C1F3.04c; n=1; Schizosa...    31   10.0 

>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 41.9 bits (94), Expect = 0.007
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +1

Query: 82  GKCFR*CSSCDDPRISPLTSQYECP 156
           GKCFR C S ++ RISPLTS+Y+CP
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCP 283


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 39.9 bits (89), Expect = 0.028
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = -1

Query: 73 FHQSRTKVRGSKAIRYRPSSNRK 5
          F   RTKVRGSK IRYRPSSN K
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSNHK 28


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 35.5 bits (78), Expect = 0.61
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = -1

Query: 73 FHQSRTKVRGSKAIRYRPSSNRK 5
          FH  RTKV GSK IRY PS N K
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLNHK 28


>UniRef50_UPI0000F1F069 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 389

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +3

Query: 93  SLMFVLRRSKNFTSNVAIRMPPLIPINHYLG 185
           S+M V+ RS  FT    IR+PP+  I+H+LG
Sbjct: 20  SVMGVVERSAVFTRQRDIRLPPIPGISHHLG 50


>UniRef50_Q5D970 Cluster: SJCHGC08915 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC08915 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 251

 Score = 31.9 bits (69), Expect = 7.5
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
 Frame = +3

Query: 144 IRMPPLIPINHYLGVLKTNKIEPR----SYSIIPCTKYSSSFLARFEHSNLFKVKLSAHL 311
           IR P LI  N +  + ++N+I P+    S S IPCT Y  S+      +NL    L+ + 
Sbjct: 75  IRRPTLITTNSFNCLNESNRIRPKPLGLSSSTIPCTNYQVSYPNEKYFNNLM-TTLNDNN 133

Query: 312 DTHRRAPR*DFDIDRRFLERRLTDDMLRKRVSITADACTDS 434
           +  +  P      +RR      + +     VS T+   T S
Sbjct: 134 NNQKHPPPPPIPQNRRTSASGSSSNGSLSLVSSTSSGSTSS 174


>UniRef50_Q10409 Cluster: UPF0293 protein C1F3.04c; n=1;
           Schizosaccharomyces pombe|Rep: UPF0293 protein C1F3.04c
           - Schizosaccharomyces pombe (Fission yeast)
          Length = 288

 Score = 31.5 bits (68), Expect = 10.0
 Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 9/60 (15%)
 Frame = -3

Query: 206 YFVGFQN-SEVMINRDKWGHSYCDVRGEILG------SSQD--EHQRKHLPKVFSSIKNE 54
           Y VG+ N + ++++  KWGHS+ +V  E+L        +QD  E ++K+L ++ +S + +
Sbjct: 142 YIVGYPNEARLLMDNFKWGHSFFEVNEELLDIYAQCHDAQDIQEKEKKYLEEMEASYQEQ 201


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,786,379
Number of Sequences: 1657284
Number of extensions: 8218535
Number of successful extensions: 18075
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18073
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)