Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0334
         (478 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   1.0  
AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.       25   1.4  
AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.      23   4.1  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   5.5  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   7.2  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.4 bits (53), Expect = 1.0
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +3

Query: 348 IDRRFLERRLTDDMLRKRVSITADACTDSAAHKCNYELFNR 470
           I +   +  +  ++L    +I +D   DS+   CN E FN+
Sbjct: 620 ISKELTKASIIQEILNIPTTIASDVAFDSSDFPCNSEEFNK 660


>AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.
          Length = 113

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 345 DIDRRFLERRLTDDMLRKRVSITADACTDSAAHK 446
           DID RF ER +      K+V++      DSA  K
Sbjct: 46  DIDNRFYERVVELKKKGKKVTVAIGGWNDSAGDK 79


>AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.
          Length = 110

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 204 IEPRSYSIIPCT-KYSSSFLARFEHSNLFKVKLSA 305
           I P+ Y    C  +   SFL ++EH+++ ++  SA
Sbjct: 37  IAPKRYEAWYCAGECMISFLPKYEHTHVMQLSTSA 71


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 123 SWIVARRTSAKAFAKGVFINQERKLEVRR 37
           +W++  RT      KG    Q +KLE R+
Sbjct: 23  TWVMVYRTEKYQKLKGEVEKQSKKLEKRK 51


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -2

Query: 444 CAPRCRCTH 418
           C P C CTH
Sbjct: 604 CGPNCMCTH 612


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,468
Number of Sequences: 2352
Number of extensions: 8472
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)