Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf0333
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031133-3|CAM28211.1| 353|Homo sapiens zinc finger CCCH-type c... 33 1.1
AK096458-1|BAC04796.1| 410|Homo sapiens protein ( Homo sapiens ... 33 1.1
AF464873-1|AAL69964.1| 1106|Homo sapiens myoneurin protein. 33 1.1
DQ084244-1|AAZ31363.1| 758|Homo sapiens polycystic kidney disea... 32 1.4
BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein LO... 31 4.4
BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein LO... 31 4.4
AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein. 31 4.4
AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein. 31 4.4
DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated... 30 7.7
AK127686-1|BAC87084.1| 401|Homo sapiens protein ( Homo sapiens ... 30 7.7
AK124902-1|BAC85988.1| 1168|Homo sapiens protein ( Homo sapiens ... 30 7.7
>AL031133-3|CAM28211.1| 353|Homo sapiens zinc finger CCCH-type
containing 12D protein.
Length = 353
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 427 RPHYIKILTR*NEHNARTSTRPGTGASASRPNPTRPG 317
RPH+ ++ +E A+T RPG GA RP P PG
Sbjct: 279 RPHHAQLAVA-DELRAKTGARPGAGAEEQRP-PRAPG 313
>AK096458-1|BAC04796.1| 410|Homo sapiens protein ( Homo sapiens
cDNA FLJ39139 fis, clone NTONG2009229. ).
Length = 410
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = -2
Query: 427 RPHYIKILTR*NEHNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIF 251
RP YI+ L + + A+T P T P+ + GPQSQ ++ +NL LT IF
Sbjct: 7 RPSYIRSLRKAEKRGAKT---PSTNVKPKTPHQRKGGPQSQLCDKA--ANLIEELTSIF 60
>AF464873-1|AAL69964.1| 1106|Homo sapiens myoneurin protein.
Length = 1106
Score = 32.7 bits (71), Expect = 1.1
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = -2
Query: 427 RPHYIKILTR*NEHNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIF 251
RP YI+ L + + A+T P T P+ + GPQSQ ++ +NL LT IF
Sbjct: 130 RPSYIRSLRKAEKRGAKT---PSTNVKPKTPHQRKGGPQSQLCDKA--ANLIEELTSIF 183
>DQ084244-1|AAZ31363.1| 758|Homo sapiens polycystic kidney disease
2-like 1 variant protein.
Length = 758
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 478 RTGSGPRSPASADLPSRKSCRFVSCAIGTFCTTAVQRSAQN 600
R +GPR PA+A + + S + C +G + TT + +A+N
Sbjct: 5 RRHTGPRCPAAASISVKASEASLPCPLGLWGTTLTENTAEN 45
>BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 59 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 190
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 59 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 190
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 59 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 190
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein.
Length = 423
Score = 30.7 bits (66), Expect = 4.4
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 59 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 190
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated
protein protein.
Length = 5005
Score = 29.9 bits (64), Expect = 7.7
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -3
Query: 222 TCCGYGYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRK 43
T YG + + V S + SRS E++ P+ R S S PY PS + + Q R
Sbjct: 1325 TAAFYGDKQPVTVGVQFSSDVSRSDENVLDSPKQRRSFGSFPYTPSA---DSNSFHQYRS 1381
Query: 42 LFPDLSAASS 13
+ +S A S
Sbjct: 1382 MDSSMSMADS 1391
>AK127686-1|BAC87084.1| 401|Homo sapiens protein ( Homo sapiens
cDNA FLJ45784 fis, clone NETRP2006468. ).
Length = 401
Score = 29.9 bits (64), Expect = 7.7
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -3
Query: 222 TCCGYGYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRK 43
T YG + + V S + SRS E++ P+ R S S PY PS + + Q R
Sbjct: 311 TAAFYGDKQPVTVGVQFSSDVSRSDENVLDSPKQRRSFGSFPYTPSA---DSNSFHQYRS 367
Query: 42 LFPDLSAASS 13
+ +S A S
Sbjct: 368 MDSSMSMADS 377
>AK124902-1|BAC85988.1| 1168|Homo sapiens protein ( Homo sapiens cDNA
FLJ42912 fis, clone BRHIP3024533. ).
Length = 1168
Score = 29.9 bits (64), Expect = 7.7
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = -3
Query: 222 TCCGYGYEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRK 43
T YG + + V S + SRS E++ P+ R S S PY PS + + Q R
Sbjct: 1078 TAAFYGDKQPVTVGVQFSSDVSRSDENVLDSPKQRRSFGSFPYTPSA---DSNSFHQYRS 1134
Query: 42 LFPDLSAASS 13
+ +S A S
Sbjct: 1135 MDSSMSMADS 1144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,012,470
Number of Sequences: 237096
Number of extensions: 2222157
Number of successful extensions: 7894
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7892
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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