Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0331
         (676 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    66   7e-10
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    48   2e-04
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    45   0.001
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.055
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    38   0.29 
UniRef50_A5LFU4 Cluster: Putative uncharacterized protein; n=2; ...    36   0.68 
UniRef50_A7RZL6 Cluster: Predicted protein; n=1; Nematostella ve...    35   2.1  
UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT t...    33   4.8  
UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:...    33   6.3  
UniRef50_UPI000023F584 Cluster: hypothetical protein FG05908.1; ...    33   8.4  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 66.1 bits (154), Expect = 7e-10
 Identities = 34/44 (77%), Positives = 36/44 (81%)
 Frame = +3

Query: 255 AAGTRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 386
           AAGTRLALQ  LVK FKV SF+L+GL RV Y YFSSLPPR GSG
Sbjct: 60  AAGTRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103



 Score = 33.5 bits (73), Expect = 4.8
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +1

Query: 202 SFLTATILVYAIGAGITA 255
           SFLTA  L+YAIGAGITA
Sbjct: 42  SFLTAATLIYAIGAGITA 59


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +3

Query: 399 LLPSLDVVAVSQAPSPESNPDSP 467
           LLPSLDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 27/54 (50%), Positives = 30/54 (55%)
 Frame = +1

Query: 208 LTATILVYAIGAGITALLAPDLPSNCSSLKYLKCTHSDYEAS*ESRIVIFRHYL 369
           LTATIL+YAIGAGITA     L       K L   HS+Y+      IVI  HYL
Sbjct: 314 LTATILIYAIGAGITAAAGTRLALQLIFGKVLSSHHSNYKTKIWPYIVISCHYL 367



 Score = 42.7 bits (96), Expect = 0.008
 Identities = 32/78 (41%), Positives = 41/78 (52%)
 Frame = +3

Query: 255 AAGTRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG*FARLLPSLDVVAVSQ 434
           AAGTRLALQL   K+   +    +  +  PY   S              L  L++ A+SQ
Sbjct: 330 AAGTRLALQLIFGKVLSSHHSNYKTKIW-PYIVIS-----------CHYLSYLEL-AISQ 376

Query: 435 APSPESNPDSPLPVTTMV 488
           APSPESN +SPLPV  M+
Sbjct: 377 APSPESNSNSPLPVKAML 394


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.055
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +2

Query: 329 PRKSPVSLFFVTTSPCREW 385
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 37.5 bits (83), Expect = 0.29
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +3

Query: 366 PPRAGSG*FARLLPSLDVVAVSQAPSP 446
           PP+  SG  +RLL  +D+VA+SQAPSP
Sbjct: 46  PPKVSSGKVSRLLLPVDIVAISQAPSP 72


>UniRef50_A5LFU4 Cluster: Putative uncharacterized protein; n=2;
           Streptococcus pneumoniae|Rep: Putative uncharacterized
           protein - Streptococcus pneumoniae SP3-BS71
          Length = 81

 Score = 36.3 bits (80), Expect = 0.68
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = -3

Query: 260 SSAVIPAPIAYTKIVAVKKL 201
           ++AVIPAPIAY K+VAVKKL
Sbjct: 3   AAAVIPAPIAYIKVVAVKKL 22


>UniRef50_A7RZL6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 73

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = -3

Query: 260 SSAVIPAPIAYTKIVAVKK 204
           ++AVIPAPIAY K+VAVKK
Sbjct: 43  AAAVIPAPIAYIKVVAVKK 61


>UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT
           transcription complex, subunit 3; n=1; Rattus
           norvegicus|Rep: PREDICTED: similar to CCR4-NOT
           transcription complex, subunit 3 - Rattus norvegicus
          Length = 750

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 357 SSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLP 473
           +++P   G G  A   P L + A S  PSPE  PD+PLP
Sbjct: 607 AAIPTGHGRGRLAPHAPPLXLRAHSAVPSPEPLPDTPLP 645


>UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:
            Mucin-16 - Homo sapiens (Human)
          Length = 22152

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +3

Query: 351  YFSSLPPRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVA 494
            + ++ P    S  F+ + PS+   +   + SPES P SPLPVT ++ +
Sbjct: 5621 WMTTPPVEETSSGFSLMSPSMTSPSPVSSTSPESIPSSPLPVTALLTS 5668


>UniRef50_UPI000023F584 Cluster: hypothetical protein FG05908.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG05908.1 - Gibberella zeae PH-1
          Length = 807

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 521 RHLKDASPVLDHAICKSYPDSSKLTTSDARPPSI 622
           RHL++ SP  D  I   + D++  TT  +RPPS+
Sbjct: 30  RHLREKSPA-DSGIADVFDDAATTTTDSSRPPSV 62


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,327,066
Number of Sequences: 1657284
Number of extensions: 14615141
Number of successful extensions: 39509
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 37627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39486
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)